Gene Dret_0127 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_0127 
Symbol 
ID8417931 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp166683 
End bp167459 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content63% 
IMG OID645036692 
Productprotein of unknown function DUF218 
Protein accessionYP_003197007 
Protein GI258404265 
COG category[S] Function unknown 
COG ID[COG1434] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.703428 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTTGTCC TGAAAAAAAT GGTGGCCCGG CTCGTGTTTC CCTTGCCTCT GGCTTTTGAA 
CTCCTCGTCG CTGGGCTCGT GATCCTGTTT GGCTTCCGCC GTTGGCAACG AACCGGACGC
TGGCTGGTCC TGGCTGGGAC GGCAGTGTTG CTTGTCAGCA CCACTCCGGC GGTGCCGCAA
TGGGCCATGC GGACTCTGGA AGGACGGTTT CCCGCCATTG ATATGACTGC GGCCAAAGCC
GCTGATGCGC AATGGGTCGT GGTTCTCGGG GGTGGGCACG CCTCGGACCC GGGGCTTCCG
GTCAGCGCCA AAGTCGGAAC GTCAACCATG TATCGGCTGG TGGAGGGGGT GCGGATCGTC
CGCCAACTCC CGGGGGCCAC GTTGCTGCTT TCCGGGTATG CCGGCAAGGA GGCGGTTTCC
AATGCCCGGA TCAAGGCGGA CCTGGCCAAG GCATTGGGCT ACGAAGGGCC GCTGGTTCTG
GAGGAAAGAC CGCGGGATAC GGCCCAAGAG GCGGCCATGA TCACCGAGCG CCTCGGCCAG
GCCCCCTTCG TGCTCGTGAC CTCTGCCTCG CATATGCCAC GAGCCATGGC CCTGTTTCAG
GGACAGGGCT CCCATCCGAT TGCCGCGCCC ACCGGCCATT TGGCGCCCCG AGAAGCCTTA
CAGGCCTGGG ACTGGTTTCC CAATGCCCAA GACGCCTATT GCCTCCAACG CGCTGTCTAT
GAATATCTTG GACTTGGGTG GGCCTGGTTG CGGGGGCAAC TCGAACAGCC CGTATGA
 
Protein sequence
MFVLKKMVAR LVFPLPLAFE LLVAGLVILF GFRRWQRTGR WLVLAGTAVL LVSTTPAVPQ 
WAMRTLEGRF PAIDMTAAKA ADAQWVVVLG GGHASDPGLP VSAKVGTSTM YRLVEGVRIV
RQLPGATLLL SGYAGKEAVS NARIKADLAK ALGYEGPLVL EERPRDTAQE AAMITERLGQ
APFVLVTSAS HMPRAMALFQ GQGSHPIAAP TGHLAPREAL QAWDWFPNAQ DAYCLQRAVY
EYLGLGWAWL RGQLEQPV