| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0124 |
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| Symbol | |
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| ID | 8417928 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 163151 |
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| End bp | 164356 |
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| Gene Length | 1206 bp |
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| Protein Length | 401 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 645036689 |
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| Product | tryptophan synthase subunit beta |
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| Protein accession | YP_003197004 |
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| Protein GI | 258404262 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0133] Tryptophan synthase beta chain |
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| TIGRFAM ID | [TIGR00263] tryptophan synthase, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.95289 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACACAA AAACAGAATT CCCGGATGCC GGATATTACG ACGGATTCGG CGGCCAGTTT
GTCCCTGAAT TGCTGATGCC GCCCTTGATC GAATTGGAAG AGGCGATGCA GTCTGTCCTG
CCCAGTCAGG CGTTTCAAGA GGAGTTGGCT GAAGTCCTCC AGGATTACGT GGGGCGACCG
ACGCCGTTGT ATCGATGCCG TAATCTTTCC AAGCGACTTG GATTCGACCT GTGGCTCAAA
CGTGAGGACC TGGCGCATAC AGGCGCGCAT AAGATCAACA ACACCATCGG ACAGGCCCTC
TTGGCCAAGC ATATGGGCAA GCGGTGCCTG TTGGCCGAAA CCGGAGCGGG GCAGCACGGG
GTGGCCACAG CCACGGCTGC GGCCATGCTG GGTATGGAGT GCATCGTGTA TATGGGGGCC
AAAGATGTGC AGCGCCAAGC CCATAACGTT CACCGGATGC GTCTTCTGGG GGCGAAGGTG
GAAGCGGTGG ACAGCGGGAC CCAGACATTG AAGGACGCCA TCAGCGCGAC CTTGCGGCAC
TGGATCCGGG ACCAGGCCAC GGCGCACTAT TGTATCGGCT CCGTCGTCGG CCCCCATCCT
TTCCCGGCCC TGGTCCGCGA CCTGCAGTCG GTGATCGGTA CGGAAACGAT TGCGCAGTGC
CAGAAGAAAA TGGGCGGGCT GCCGGACGTG GTGCTGGCCT GTGTTGGTGG GGGCTCCAAC
GCCATGGGCA TGTTCCACCC GTTCACCGAT TATCCGGAGG TCCGCCTGAT TGGTGTGGAA
GCCGCGGGCA GCGGCGAAGA GGGGTGCACC CATTCCGCGA CGTTGAGCCA GGGGACCGAA
GGGGTGTTGC AGGGCGCGCG AACCTATCTG CTCCAGACCC AGGCCGGACA AATCCTGCCC
TCGCATTCCG TGGCCCCGGG GCTCGACTAC CCAGGGGTCG GCCCGGAACA TGTGGCCTTC
ATGACCTCAG GTCGGGCTGA ATATGTCTGT GTCTGCGACG ATGTGGCCCT GGAAGCCTTT
TATACCCTTT CCCGGGACGA GGGGATCATT CCGGCCCTGG AAAGTTCCCA TGCCCTGGCC
TACGCCATGG CGCTGCAAGG AGAAATCCCA TCCGGCAGCC GCGTGGTCGT CACGCTGTCC
GGGCGCGGGG ACAAGGATTT GGGCATCGTC CGGGAGCGCG AAGGCGCTGC GGAGACCAAG
GCGTAG
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| Protein sequence | MNTKTEFPDA GYYDGFGGQF VPELLMPPLI ELEEAMQSVL PSQAFQEELA EVLQDYVGRP
TPLYRCRNLS KRLGFDLWLK REDLAHTGAH KINNTIGQAL LAKHMGKRCL LAETGAGQHG
VATATAAAML GMECIVYMGA KDVQRQAHNV HRMRLLGAKV EAVDSGTQTL KDAISATLRH
WIRDQATAHY CIGSVVGPHP FPALVRDLQS VIGTETIAQC QKKMGGLPDV VLACVGGGSN
AMGMFHPFTD YPEVRLIGVE AAGSGEEGCT HSATLSQGTE GVLQGARTYL LQTQAGQILP
SHSVAPGLDY PGVGPEHVAF MTSGRAEYVC VCDDVALEAF YTLSRDEGII PALESSHALA
YAMALQGEIP SGSRVVVTLS GRGDKDLGIV REREGAAETK A
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