Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_0081 |
Symbol | |
ID | 8417885 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | + |
Start bp | 107346 |
End bp | 109112 |
Gene Length | 1767 bp |
Protein Length | 588 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 645036646 |
Product | Aldehyde ferredoxin oxidoreductase |
Protein accession | YP_003196961 |
Protein GI | 258404219 |
COG category | [C] Energy production and conversion |
COG ID | [COG2414] Aldehyde:ferredoxin oxidoreductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTACTA GTGCGAAAAT TTTGCACGTC GATCTCTCAA GCGGCGAGAG TGATATCCAG GAAATCTCGG GCCGGGAAAT GTGGCTCGGC GGCTGCGGTC TTGCGGCCTG CTTGTTTGAA CGCTTCGGCG ATCCGGCACA GCCCCCGTCT GCCCCCGCCC AGCCGCTGAT CTTCGCCATC GGGCCGCTGA CCGGGTATTT CCCGCTGCAA AGCAAGGTGG TCGCGGGGTT CGTGTCCCCG TACACCGGTC AGTACGCCGA GAGCCACGCC GGCGGGCGGC TGGGGCTTGC GCTGCGTTTC AGCGGATTTG AGGCCCTGGT CGTGACCGGG CGGGCCTCGA CCCCCTCCTG CCTCATCGTC GGCAGCCGGC AGCTTCAGAT CAAGGATGTC CATTATCTCT GGGGCCATGA CGTCTTTAGC ACCGGCAAGC TCCTGCGCCA GATCCACAGC CAGCATTCCG GCCATCGCAG CATCTTGCGC ATCGGCCCGG CCGGGGAACA GGGAGTAGCC TACGCGGCGA TCAACGTGGA TACCTACCGC CATTTCGGAC GTCTTGGCGC CGGAGCGGTC ATGGGGGGCA AACACCTCAA GGGGATCATT GTGGCCGGGG ATGCGAGTCT CGATCTCCCC AAGGAACGCC GCAAATCCTA CAACGAGACC TATACCCAGG TGCACCATGC GATCACTGGC CAGGATGTGA TGCGCAAATA CCACGATTTG GGCACCCCGG AGAATCTCGA GCCGCTCAAC GCCCTGCAAG CCCTGCCCTG GCGCAATCTC CAGGCGACCA ACGATCCGGC GGTCTCCAGT ATCTCCGGGG AAACCTTCGC CCGGGATCTC CTTTTGCGCC AGACGGCCTG TGCCGGGTGC CCGGTGGGGT GTATCCATGT CGGCCTGCTC CGGGAACGGT TCGGTTCAGA CCATGAATTT TTCTACCGCC AGGTCAGCTA CGATTACGAA CCGATTTTCG CCCTGGGCTC CATGCTCGGC ATGGAGCGGG CTTCGGAGAT CTTAACCTTA CTGGAGGATG CCGAACGGTA CGGCCTGGAC GTGATCTCCT GCGGTGTGGC TCTGGCTTGG GCCACGGAAG CCCTGGAAAA AGGGGTGGTG ACCGAAAAGG AGACCCTGGC GCCTCTGGCC TTCAACACCC TGGAGCCGTA CCGGACCGCT TTGGGCCATC TTGCCTTGCG TAGCAACGAG TTCTACCACG CCCTCGGCCG GGGAGCGGCC CGGGCGGCCG CAGAGTACGG GGGAACGGAT TTTGCCTGTG TTCTGGGCCA GGAAATGGCC GGGTACGCCA CCGGGGAAAA CTATTTTGTG AGCCAGGCCT ATGGGTTCCG CCATTCACAC CTCGACAGCG GCGGCTACGC CTATGACCAG AACGAGGGCG AGCGGGACGT GGACACGGCC GTCACGGCCC TGGTGGATGA CGAACGCCAG CGGATCATGG TCAGTTGCAT GGTTGGCTGC CTCTTCGCCC GCAAGGTCTA CACGGCCGAA CAGCTCCAGA CCTGTCTTGA TGTGCTCGGT TACTCTGCGT TGGCCGCAGG GCTTGAAGAT CGGGCGGCCG CGGTGCAGGC CAAGCGGTGG GCCCTGAAGT GCGCAACCGG ATTTGATCCC GACACGGTGG TCATCCCCCG GCGTTTCCAG GAAATCACCA CCTGGAAAGG AGCGATGGAC CCAGCGTACA TGAACGAACT GGGCCGGGCC TATGCCCGGA CTATTCAGCG TATGGCCGCC AACGCGCCCC GCTGGAACGA GGAATAG
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Protein sequence | MRTSAKILHV DLSSGESDIQ EISGREMWLG GCGLAACLFE RFGDPAQPPS APAQPLIFAI GPLTGYFPLQ SKVVAGFVSP YTGQYAESHA GGRLGLALRF SGFEALVVTG RASTPSCLIV GSRQLQIKDV HYLWGHDVFS TGKLLRQIHS QHSGHRSILR IGPAGEQGVA YAAINVDTYR HFGRLGAGAV MGGKHLKGII VAGDASLDLP KERRKSYNET YTQVHHAITG QDVMRKYHDL GTPENLEPLN ALQALPWRNL QATNDPAVSS ISGETFARDL LLRQTACAGC PVGCIHVGLL RERFGSDHEF FYRQVSYDYE PIFALGSMLG MERASEILTL LEDAERYGLD VISCGVALAW ATEALEKGVV TEKETLAPLA FNTLEPYRTA LGHLALRSNE FYHALGRGAA RAAAEYGGTD FACVLGQEMA GYATGENYFV SQAYGFRHSH LDSGGYAYDQ NEGERDVDTA VTALVDDERQ RIMVSCMVGC LFARKVYTAE QLQTCLDVLG YSALAAGLED RAAAVQAKRW ALKCATGFDP DTVVIPRRFQ EITTWKGAMD PAYMNELGRA YARTIQRMAA NAPRWNEE
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