Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_0056 |
Symbol | |
ID | 8417859 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | - |
Start bp | 73677 |
End bp | 74741 |
Gene Length | 1065 bp |
Protein Length | 354 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 645036620 |
Product | transposase IS116/IS110/IS902 family protein |
Protein accession | YP_003196936 |
Protein GI | 258404194 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3547] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGTGCC ATTTAGCAAA TCATACCATC GGTGTCGATC TCGGTGACAA GCAGAACGTC GTATGCGTGT TGGACTGGAA CGGGGACATT GCCACCACCT TTAAGGTGAC CAATACCAAG ACTGCGATGC GTAAACGGTT TGCTGCCTAC TCAGGAGCCT TTGTTGCCAT TGAGGCGGGG ACACACTCTG CCTGGATCAG CCGCCTGCTC AAAGAGCTTG GTTGCGCAGT TGTCGTCGGC AACCCTCGCA AACTCCGCTG CATTTGGCAG GAGCCGATCA AAACAGACTT TCGCGACGCT GAGATGTTGG CCCGGGTGGC CAAGATGGAT CCCAAACTCT TGCGCCCCAT TGAGCACCGA AGCGCAGATG CACAAGCCAG GCTGGCCATC CTGCAAGCCC GTGATGCGCT GGTAAAAAGC AGGACCTCTC TTATCAACCA CGTTCGAGGG ACCGTAAAAT GCGCCGGGGA ACGCCTGCCG AAATGCAGCG CCGCCAGCTT CCACAAAAAA GCACCGGAGC ATATCCCCAG TGAACTCAAA GCAGCCCTGC TGCCGTTGAT AGAACAAATT GCCAATTTCA CTGAAGGGAT AAAAAAATAC GAGCACGAAG TGACACACCT CAGCCGCACC CACTACCCTG AGACAGAAGT GTTGCGACAA GTCCCCGGCG TTGGGCCGAT CACAGCCTTG GCGTTCGTTT TGACGCTCGA AGATAAGGAC CGTTTCACCA AGAGCCGAGA TGTAGGGCCA TTTCTAGGCT TGGTTCCCAA AAGGGACCAA TCCGGGGATA CCGACAAGCA GCTACGCATC ACGAAATGCG GTAACTCCCA GTTGCGCACC TTGCTGGTCA ATGTCGCTCA CTACGTCCTG GGCCCATTTG GGGCTGATAG TGAGCTGCGA CGATTCGGGC AGCGCATTGC CGCGAGAGGG GGCACGATCG CCAAGAAACG GGCTGTGGTA GCTGTGGCGC GCAAACTGGC GGTTTTGCTC CACCGACTGT GGGTGACGGG GGAGGAGTAT CACCCATTTT ATTGCCACAA GGATTCCACC GTCGAAGCTG CATAA
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Protein sequence | MKCHLANHTI GVDLGDKQNV VCVLDWNGDI ATTFKVTNTK TAMRKRFAAY SGAFVAIEAG THSAWISRLL KELGCAVVVG NPRKLRCIWQ EPIKTDFRDA EMLARVAKMD PKLLRPIEHR SADAQARLAI LQARDALVKS RTSLINHVRG TVKCAGERLP KCSAASFHKK APEHIPSELK AALLPLIEQI ANFTEGIKKY EHEVTHLSRT HYPETEVLRQ VPGVGPITAL AFVLTLEDKD RFTKSRDVGP FLGLVPKRDQ SGDTDKQLRI TKCGNSQLRT LLVNVAHYVL GPFGADSELR RFGQRIAARG GTIAKKRAVV AVARKLAVLL HRLWVTGEEY HPFYCHKDST VEAA
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