Gene Dred_3269 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_3269 
Symbol 
ID4957667 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp3549830 
End bp3550378 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content49% 
IMG OID640182455 
Productmicrocompartments protein 
Protein accessionYP_001114594 
Protein GI134301098 
COG category[C] Energy production and conversion
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG4577] Carbon dioxide concentrating mechanism/carboxysome shell protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.942262 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATAGAG CAATAGGTAT GATTGAGCTT TCTAGTGTTG CAAGAGGAAT TTATGCGGCA 
GACCTGATGC TTAAAACGGC CTACGTAGAA GTAGTCAGTG CAACGTCTGT CTGTCCTGGG
AAATACATTG CCATCGTACA AGGAGATGTT GCCGCCGTAG AAAGCTCCAT TAGCGTAGGC
ATCGAAGCAG CGGGAGAATA CCTGATCGAT AGTTTTATCC TCCCCAATGT CCATGAGGCC
GTTTTCCCGG CCATTACAGC TACGACCATG CCGGATGGAA CTGGAGCTTT GGGGATTATG
GAATCCTTTT CCCTGGCATC CATGATCATT GCAGCCGATG CGGCACTCAA AGCTGCAGAC
ATACAGGCTC TGGAACTACG TTTGGGTAGG GGACTGGGCG GCAAAGCCTA CTTTACCTTT
ACCGGAGATG TTGCCGCTGT GCAAGCAGCT GTTGAAGCCG GAAAAGCCCT CGTTCTCGAA
AATGGTCTGT TAGTAGATAT AGAAGTAATT CCATCTCCGG CGGACAAGTT GTGGACAACC
CTCTACTAA
 
Protein sequence
MYRAIGMIEL SSVARGIYAA DLMLKTAYVE VVSATSVCPG KYIAIVQGDV AAVESSISVG 
IEAAGEYLID SFILPNVHEA VFPAITATTM PDGTGALGIM ESFSLASMII AADAALKAAD
IQALELRLGR GLGGKAYFTF TGDVAAVQAA VEAGKALVLE NGLLVDIEVI PSPADKLWTT
LY