Gene Dred_3232 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_3232 
Symbol 
ID4957474 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp3514773 
End bp3515411 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content40% 
IMG OID640182420 
Productcyclic nucleotide-binding protein 
Protein accessionYP_001114559 
Protein GI134301063 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACATCAA AAATTGTTCA GTTATTTCCA AAAAGCAAGA TTGAAGAGTG GCTCAGTCAT 
GGAAAAGAAA TTAATTTTAA GAGAGGTAAC TACATTACCG GTGCGGATAA GCTAACCAAC
GATATCTATC TCATCAAAAA AGGGGAGGCC CGTTTATTTC ACATTCATGA AGATGGTAAG
GAATGTATTT TAGGGCTGTT ATCTGCGGGG GATTTTATTG ATCTAATCGA TATCTTTACA
AAAAAAAGAA GTGGTGCCTT TTCCAAAGCT TTAACAGAAG TGACAGTTAT TGCCGTTCCC
AAAGCAGAAG TGAGAAAAGT TATTGAAGAA AATCCCCCGC TGGCCATGTC CCTGCTCAGT
TACTTATCAG AAAGACTCCA GGAAACCGTT GAAATTCTTG AACAAGTGGC CTATGGAAAA
GTGGAAGAGC GGCTCCTCTT TTTATTAAAA AAAATAGCTG ATACTAATCA AGAAGATAAT
GGCTGGTACC CCATCCCTGC CGCAATCACG CACCAGGATT TGGCGGGTAT GGTTGCATCC
AGTCGTGAAA CGGTAACTTT GTTGATAAAC AAGCTGGCAT TGTTTGGAAT AATACGTTTG
CACAAAAGCA AAATCTGGGT CAAGTTGGAA AGCAATTAG
 
Protein sequence
MTSKIVQLFP KSKIEEWLSH GKEINFKRGN YITGADKLTN DIYLIKKGEA RLFHIHEDGK 
ECILGLLSAG DFIDLIDIFT KKRSGAFSKA LTEVTVIAVP KAEVRKVIEE NPPLAMSLLS
YLSERLQETV EILEQVAYGK VEERLLFLLK KIADTNQEDN GWYPIPAAIT HQDLAGMVAS
SRETVTLLIN KLALFGIIRL HKSKIWVKLE SN