Gene Dred_3159 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_3159 
Symbol 
ID4957170 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand- 
Start bp3439226 
End bp3440377 
Gene Length1152 bp 
Protein Length383 aa 
Translation table11 
GC content46% 
IMG OID640182347 
ProductUDP-N-acetylglucosamine 2-epimerase 
Protein accessionYP_001114486 
Protein GI134300990 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0381] UDP-N-acetylglucosamine 2-epimerase 
TIGRFAM ID[TIGR00236] UDP-N-acetylglucosamine 2-epimerase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTAAAG TACTTACCGT GTTCGGTACC CGGCCCGAAG CAATTAAAAT GGCTCCATTG 
GTAAAAGAAT TGAACAGTCG GCCGGATAAA ATTAAATCCA TGGTGGCAGT AACGGCCCAG 
CACCGGGAAA TGTTGGATCA GGTTCTGGAA CTGTTTGATA TCATTCCAGA CTATGATCTT 
AATATAATGC AGGAGGGTCA AACCCTCTAT GATGTTACCA CAAGGGCGTT GGAAGGCCTA 
AAGTCGGTCT TAATTGAATG TAACCCAGAT CTAGTGCTTG TGCACGGGGA TACCACCACC 
ACCTTCGTGG CAGCCCTAGC CGCCTATTAT CGGCAGATTC CAGTAGGACA CGTAGAGGCA 
GGGCTGAGAA CCCATAATAA ATACTCACCC TTCCCCGAAG AAATGAACCG GCGCCTTACT 
GGGGCCCTGG CGGAATATCA TTTTGCACCA ACCCAGAAGG CCATGCAGAA CCTGATTAAA 
GAAAACATTA ACATGGACAA TATTTTCGTT ACCGGCAATA CCGTCATTGA CGCTCTGAAG 
GCAACCGTAA GAGAAGATTA TGTATTTTCA GATCCACTGC TAAATAAAAT AGATTTTACC 
AAACATCGTG TTTTACTGGT AACAACTCAC CGCCGGGAAA ACCTGGGAGA GCCCATGCGG 
GCCATTTATC TGGCCCTTAA GGAGATCGTT GCAACACACT CGGATGTAGA GATCGTTTTC 
CCGGTACATA AGAACCCTGC GGTACGTCGT GTGGTTAATG AAGTATTAGG AGGAATCGAG 
AGGGTTCACC TAATTGAACC CTTGCAGTAT GAGCCCTTTA TTAACTTGAT GCAGCGTTGT 
TACCTGGTAT TAACAGACTC CGGGGGGATG CAAGAAGAAG CCCCTTCCCT GGGGAAGCCC 
GTCTTAGTAT TACGGGATAC CACCGAGCGA CCGGAAGCCA TTGAAGCGGG AACCGTAAAG 
CTGGTGGGCA CCGATCGGGA GAAAGTTCAT ACGGTCACAA ACCATTTATT GAACAATTTC 
GAATCTTACA CAAAAATGTC AGAGGCTGTC AATCCCTATG GGGATGGTTT GGCCTCCAAA 
CGAATTGTTG ATTTTATATG CTATAGATTC GGCCTACAAG AAGAACAGCC AGAAGAGTTT 
TTGACAAAAT AA
 
Protein sequence
MLKVLTVFGT RPEAIKMAPL VKELNSRPDK IKSMVAVTAQ HREMLDQVLE LFDIIPDYDL 
NIMQEGQTLY DVTTRALEGL KSVLIECNPD LVLVHGDTTT TFVAALAAYY RQIPVGHVEA 
GLRTHNKYSP FPEEMNRRLT GALAEYHFAP TQKAMQNLIK ENINMDNIFV TGNTVIDALK 
ATVREDYVFS DPLLNKIDFT KHRVLLVTTH RRENLGEPMR AIYLALKEIV ATHSDVEIVF 
PVHKNPAVRR VVNEVLGGIE RVHLIEPLQY EPFINLMQRC YLVLTDSGGM QEEAPSLGKP 
VLVLRDTTER PEAIEAGTVK LVGTDREKVH TVTNHLLNNF ESYTKMSEAV NPYGDGLASK 
RIVDFICYRF GLQEEQPEEF LTK