Gene Dred_3148 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_3148 
Symbol 
ID4957132 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp3430047 
End bp3431309 
Gene Length1263 bp 
Protein Length420 aa 
Translation table11 
GC content48% 
IMG OID640182336 
ProductUDP-N-acetylglucosamine 1-carboxyvinyltransferase 
Protein accessionYP_001114475 
Protein GI134300979 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0766] UDP-N-acetylglucosamine enolpyruvyl transferase 
TIGRFAM ID[TIGR01072] UDP-N-acetylglucosamine 1-carboxyvinyltransferase 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAGAAA AAATTATTAT CTCAGGCGGT CGCCCTCTAA CCGGCTCCAT CCGTGTCAGT 
GGGGCTAAAA ATGCTGTCCT TCCAATATTG GCAGCTTCTT TACTTACCAC TACCCAAACC
CGGTTATTGG ATGTACCGGA TCTGGCAGAT GTGGGAGTGA TCTGTTCAGT TTTGCAAGAA
CTTGGTACCC GCATTGAAAA AACCAAGGAA GAGCTAGTAA TATCCATTCC CTCCCTCCAG
CACATAGAAG CCCCCTATGA ATATGTACGA AAGATGAGGG CTTCCTTTTT AGTCATGGGA
CCTTTATTAG CCAGGGAGGG AAGGGCCAGA ATCTCCTTAC CCGGGGGCTG TGCCATCGGT
ACTAGGCCCA TTGATTTACA TCTAAAGGGT TTTTCGGCCC TGGGTGCCGA CATTCGGTAT
GGTTCTGGCC ATATTGAAGC AGTGGCCAAG GAATTGACAG GAGCCGATAT TTATCTGGAT
TTTCCCAGTG TTGGGGCCAC CGAAAACATC ATGATGGCCG CTGTCCTGGC CAGAGGTCAA
ACAACCATCG AAAATGCAGC CGAAGAACCA GAAATTGTTG ATCTAGCCAA CTTCCTGAAC
GCCATGGGGG CTAAAATTAA AGGGGCTGGT ACAAAGGTAA TCCGTATCAA TGGTGTTAAG
GAACTAACTG GCACCACCCA TGCCGTCATT CCAGACCGTA TTGAAGCCGG CACATATCTA
GTGGCTGCGG CCATGACCCG GGGGGATGTT ATGGTGGAAA ATGTCATTGC AGACCATCTT
AAACCGGTTG TGGCCAAGCT AAAGGAAGCC GGTGCCGAAA TTAAAGAAGA AGAGACCCAC
ATCCAGGTTT GCTGTAATGG CATATTAAAG GGTGTGGATA TAAAGACCCT ACCCTATCCG
GGTTTTCCCA CTGATATGCA GGCCCAGTTT ATGACCTTGA TGGCTGTGGC AGAAGGCACC
AGCATAATCA CAGAAACAGT TTTTGAAAAT CGTTTTATGC ATGTTAATGA ATTAAAACGT
ATGGGTGCAA AAATTAAAAT TGAAGGGCGA ACCGCCATTG TTCAGGGTGT AAAAACTTTG
AACGGAGCAG CAGTTAAGGC CACAGACCTG CGGGCCGGTG CAGCCATGAT TTTGGCGGGC
CTAACCGCCA CAGGAGAAAC CGAAGTAGCC AATATCCATC ACATTGACCG TGGCTATGAA
AGACTAATCG AAAAACTGCA GGGTATCGGA GCAAATATTC GCCGGGTTGA AGTGAAGCAG
TGA
 
Protein sequence
MEEKIIISGG RPLTGSIRVS GAKNAVLPIL AASLLTTTQT RLLDVPDLAD VGVICSVLQE 
LGTRIEKTKE ELVISIPSLQ HIEAPYEYVR KMRASFLVMG PLLAREGRAR ISLPGGCAIG
TRPIDLHLKG FSALGADIRY GSGHIEAVAK ELTGADIYLD FPSVGATENI MMAAVLARGQ
TTIENAAEEP EIVDLANFLN AMGAKIKGAG TKVIRINGVK ELTGTTHAVI PDRIEAGTYL
VAAAMTRGDV MVENVIADHL KPVVAKLKEA GAEIKEEETH IQVCCNGILK GVDIKTLPYP
GFPTDMQAQF MTLMAVAEGT SIITETVFEN RFMHVNELKR MGAKIKIEGR TAIVQGVKTL
NGAAVKATDL RAGAAMILAG LTATGETEVA NIHHIDRGYE RLIEKLQGIG ANIRRVEVKQ