Gene Dred_3126 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_3126 
Symbol 
ID4957039 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp3400931 
End bp3402316 
Gene Length1386 bp 
Protein Length461 aa 
Translation table11 
GC content41% 
IMG OID640182314 
Productphosphomannomutase 
Protein accessionYP_001114453 
Protein GI134300957 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1109] Phosphomannomutase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00141531 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGAAC ATAACATTGC CAACTGCCGG AAGGCTTTTA AAGCATATGA TATTCGAGGT 
CGGGTGCCGG AGGAATTAAA CGAGGAGGTG GCTTACCGCA TTGGACGGGC CTATGCGCAG
TTATTTAATC CAAAGCAAGT AGTTGTTGGT TATGATGTGC GGCTAACCAG TCCTGCTTTG
GCAGCTGCTT TGACCCGTGG GTTAAGGGAA GAGGGCTGCA GAGTGGCAGA TATCGGACTT
TGCGGTACCG AGCAGGTTTA TTTTGCAACC TTTCACCTTG GTTTAGACGG TGGCATCATG
GTTACTGCCA GCCATAATCC TCAGGACTAT AACGGGATGA AGCTGGTTCA GGGTGAGGCT
CGTCCCATCA GCGGGGACAG TGGCTTAAGG GATCTCGAGG AACTTGTAGT AAGCGGGAAT
TTTGAATCTA AAGTAAATAT TGCCCTAGGT GATTACCGCA AAGTCAACAT TATGGATGAG
TATGTCCAAC ATCTGTTATC TTATATAGAT ATTTCTTTAA TTAAACCCTT GAAAATGGTT
GTGAATGCCG GGAACGGTAG TGCAGGTCAG ATTATTGATG CATTGGAACC GTATCTTCCA
GTACAATTCA TAAAGGTACA CCACAACCCA GACGGTACCT TCCCAAATGG TATTCCTAAC
CCCTTGTTGC CAGAGAACCG CGAGGTAACC GCAGAAGTCG TTAGGCAAAC TAGAGCGGAT
GTAGGTATTG CTTGGGATGG TGATTTTGAC CGCTGTTTTT TATTCGATGA GCAGGGTAAT
TTTATTGAAG GTTATTATAT AGTAGGCTTA TTAGCCCAGT CATTCCTATC AAAGCATATA
GGAGCCAAAA TTATTCATGA CCCACGTCTA ACTTGGAATA CTATAGACCT TGTAAAAAAA
ATTGGTGGGG TACCTATTCA GAGTAAAACA GGACATGCAT TTATTAAAGA ACGTATGCGT
TTGGAAGATG CAGTATATGG TGGGGAGATG TCTGCACATC ATTACTTTAA GGAATTTGCC
TATTGCGATA GTGGAATGAT TCCCTGGTTA TTAATATTAG AGATAATGTG TAAGCAAGGG
AAACCTTTAT CAGAATTAAT CAATGAAAGA ATTAAACTTT ATCCCGCCAG TGGAGAAATC
AATAGACGAG TGAACAATCC CCAGGAAGTC CTAAAAAATG TAGAGCAGCA CTTTGTAAAT
AAAAGTACTT CAGTTGACTG GACAGATGGT TTAAGTCTTG AATTTGATAA ATGGCGATTT
AATCTTCGAA TGTCAAATAC AGAACCGGTA ATTCGTCTAA ATGTAGAGGC AAAGAATGAT
TTAGACTTAA TGAAGCAAAA TACAAGTGAA CTCCTTAAAA TTATTGATGT CTTCAATAAA
CAATAA
 
Protein sequence
MAEHNIANCR KAFKAYDIRG RVPEELNEEV AYRIGRAYAQ LFNPKQVVVG YDVRLTSPAL 
AAALTRGLRE EGCRVADIGL CGTEQVYFAT FHLGLDGGIM VTASHNPQDY NGMKLVQGEA
RPISGDSGLR DLEELVVSGN FESKVNIALG DYRKVNIMDE YVQHLLSYID ISLIKPLKMV
VNAGNGSAGQ IIDALEPYLP VQFIKVHHNP DGTFPNGIPN PLLPENREVT AEVVRQTRAD
VGIAWDGDFD RCFLFDEQGN FIEGYYIVGL LAQSFLSKHI GAKIIHDPRL TWNTIDLVKK
IGGVPIQSKT GHAFIKERMR LEDAVYGGEM SAHHYFKEFA YCDSGMIPWL LILEIMCKQG
KPLSELINER IKLYPASGEI NRRVNNPQEV LKNVEQHFVN KSTSVDWTDG LSLEFDKWRF
NLRMSNTEPV IRLNVEAKND LDLMKQNTSE LLKIIDVFNK Q