| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_3004 |
|---|
| Symbol | |
|---|
| ID | 4956506 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum reducens MI-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009253 |
|---|
| Strand | - |
|---|
| Start bp | 3267157 |
|---|
| End bp | 3267783 |
|---|
| Gene Length | 627 bp |
|---|
| Protein Length | 208 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 640182193 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001114332 |
|---|
| Protein GI | 134300836 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.00127852 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGGAA TTGGAGACTA TATCTCTAAG ACTGACATAC AGCTTATCAA AAATAAAATT
AGTACTTTAC AGGAACTACC CCTAGAGACA TTTCATAAAA ATATCAAAGC TATAAGTTAT
CTCACATACC TCCTTGAAAA AGTAGGAATA AAACCGATTA TAGTTGGCGG TCATGCTGTG
GAGATCTACA CATTAGGTCA ATATACTACA GTTGACGTAG ATATTGTATT AAGCGGACGT
GAGTTAGCAA GGGAAATTTT TGAGGAGCTT AGTTTTGCAA AAGGACAAGG TTTCCGACAC
TGGTACCACG AAGAACTAGG TCTACCCATT GAGATCCCAG ATGATATACT AGCCGGTTCT
ATGGATCGAA TTATACAGGT AACCATAGAA GAAGGTTTTC ATGTCTATGT AATCGGTATC
GAAGACCTTA TTTTAGACCG GGCCAGAGCA GCCGTTTACT GGAATTCATC CGGGGATAGA
GAATGGTCCT TATTACTTAT GAATGCTCAA TATGAAGAAA TTGATTTTGA GTATCTGGAG
AACGAAGCAA AAAAAGAACC AGATGACAGC GTTTTTAAAT TAATAATAGA CCTTCGTAAT
GAAACAGAAA AATATTTAAA TGGGTAA
|
|---|
| Protein sequence | MAGIGDYISK TDIQLIKNKI STLQELPLET FHKNIKAISY LTYLLEKVGI KPIIVGGHAV
EIYTLGQYTT VDVDIVLSGR ELAREIFEEL SFAKGQGFRH WYHEELGLPI EIPDDILAGS
MDRIIQVTIE EGFHVYVIGI EDLILDRARA AVYWNSSGDR EWSLLLMNAQ YEEIDFEYLE
NEAKKEPDDS VFKLIIDLRN ETEKYLNG
|
|---|
| |