Gene Dred_2993 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_2993 
Symbol 
ID4956522 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp3253345 
End bp3254331 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content52% 
IMG OID640182182 
Productbeta-lactamase domain-containing protein 
Protein accessionYP_001114321 
Protein GI134300825 
COG category[R] General function prediction only 
COG ID[COG1234] Metal-dependent hydrolases of the beta-lactamase superfamily III 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATATAA AGAAGATTGA CCAAGAATTA AGAGAGAAAA CCGGAACCGC CGCCATAGAG 
TCCTATACTA AATATCGCCA TCGGCAGGAA CCCGCCCCGG CAGCTCCGGG TGCCAGTGTC
CTTTTTTTGG GTACCGGTGG GAATCCCGAG GCAGTTTTTA GCCAGGTGCC GAGAACAGCT
GGCTTTATCT TAGTGGTGGA TGGACTACGT CTTTATGTGG ATCCGGGACC CGGGGCTGTG
GTGCGGGCCC GGGAGGCAGG TCTTGATCTG GGTTCTCTGG ATGGGATTTT TATCTCCCAT
GGACATCTGG ACCACTATGC CGGGGCCGAG GCCGTCATTG AGGCCATGTG CTGGGGTATG
TTTGTCCGTC GGGGGGTTGT ACTGGCACCT AGGCAGGTAT TGGAGCGAGA CAGACTATTA
AGCATCTACC ACCAAGGTAA GGATCGACTT TCTGGCTATA AAGGGGGGCC GACGGTAAGA
ATTCTGGAGG CCCACCAACC GATGCCCATA GGAAAGGTTG CCCTGACACC GATACCGGCT
TATCACGGGG AGGAAAACTA TGGCTTTATT TTACAGACAG AAAGTTTAAC CCTTGGTTAC
ACCAGTGATA CCAATTATAT CCAGGGATAT ACCACCCCCG AAGGGTCGAA GGATTTATCC
TACCGGGGAC CGATCATGGA TTTAATTGAT ATTGTTGATT ACCGTACCGA TATAAAGGAA
GCCTTTAGCC AGGTGGATGT TCTAATTGCC AATGTCACCA GTCATAATGT CTATGCGCAT
CGGCATATAA CCACATTGGG GCTAGCTCAT TTACTCCGGG GCAGCAAAGT AAAACTGTGC
ATCATGACGC ATTTTAACCA TTGCTGCCTG AGCCCCGACG ACCTCCGGCC CCCCATGGCA
ACCTATGTAG AGCAGACCAG CGGCGTACGC ACCCTCTATG CGGTGGATGG GGGAAACTAC
AATATTGCGG AAATACTCAG GCGCTAA
 
Protein sequence
MDIKKIDQEL REKTGTAAIE SYTKYRHRQE PAPAAPGASV LFLGTGGNPE AVFSQVPRTA 
GFILVVDGLR LYVDPGPGAV VRAREAGLDL GSLDGIFISH GHLDHYAGAE AVIEAMCWGM
FVRRGVVLAP RQVLERDRLL SIYHQGKDRL SGYKGGPTVR ILEAHQPMPI GKVALTPIPA
YHGEENYGFI LQTESLTLGY TSDTNYIQGY TTPEGSKDLS YRGPIMDLID IVDYRTDIKE
AFSQVDVLIA NVTSHNVYAH RHITTLGLAH LLRGSKVKLC IMTHFNHCCL SPDDLRPPMA
TYVEQTSGVR TLYAVDGGNY NIAEILRR