Gene Dred_2970 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_2970 
Symbol 
ID4956411 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp3227005 
End bp3228165 
Gene Length1161 bp 
Protein Length386 aa 
Translation table11 
GC content45% 
IMG OID640182158 
Producthistidine kinase 
Protein accessionYP_001114298 
Protein GI134300802 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAGTGAGC TACTGTTTGA AAACCACTTT AGCCATTTTG CCCCGGCTGC CCGGTTACCC 
CTCAATAAGA TATTGGAGCA GTCCTGTGTA GTAAAAAAGA TTCAGGAGGT TCATTCTGTA
TTTGATGCAT TTCCCAATGT TATCTTAATT CTTAACCAGC ACAGGCAGGT TGTCTATTGT
AATAAAGCCT TAGTGGATTT GTTAAACTTG GAAGATTCCA GCAGTGTTTT GGGAGCCAGA
CCGGGAGAAG TATTAAATTG TGTACATGCC TGGGAAAATG AAGCCGGCTG TGGTACCAGC
GAGCATTGCA TGTCCTGTGG TGCTGCTTTG GCCATTTTGG CAGGGCTGTC TGGCGAAAGG
GCCTCCCGAG AATGTAGGGC CACTGTCAAA CAACAGGGGC AGTTTATTTC GCTGGATCTG
CTTTTTACGG CCAAGCCCCT TACTCTGGAA GGACAGTGTT TTACCCTCGT ATTTGTAACA
GATATTAGTC ATGAAAAAAG AAGGAAATTC TTAGAACGAA TTTTTTTCCA CGATATTCTG
AATACCGCAG GCAGTCTCCG TGGCATTGTT GAGTTGCTGG GAACCGTCAA AGAATCGGCC
CAAAAACAGG AACTGATGAA GGATTTGGAG GAAGTGGCTG GTTCTTTAAT TGAAGAGATT
CTTGACCAGC GGGACTTGCT CAGTGCAGAA AATAATGAAT TAAAGGTAAG TCCCGAACCC
TTTGATCCAG TGGAACTTTT GAACAGTATG ATGGATCATT ATGTTAACCA CCCAGTGGCC
CAGGGAATCA CCCTGGAGGT AGTAGAAACC CTAGAAGAGG CTACCATTGT TAGTGACCCG
ATTCTTTTAA AGAGGGTGCT GGGCAATATG GTAAAGAACG CTTTGGAAGC CTCCCAGCCA
GGGGATGTTG TATCCCTGGG TGTTAAACAA ATTGGTGCTG AAATTTATTT TTGGGTTAAC
AACCCAAGAG AAATGCCCAG AGATGTTCAA CTGCAGGTCT TTAAAAGATC TTTTTCTACC
AAGGGTGGCA GCAGGGGATT GGGGACTTAC AGTATGAAAC TTCTCACAGA ACGTTATTTG
AAGGGCAGTA TCTCCTTTAC AGTTAAAGAA GGAAGGGGTA CGACCTTTAC CATACGTTAC
CCCTTAACCA TTCGAGAATA G
 
Protein sequence
MSELLFENHF SHFAPAARLP LNKILEQSCV VKKIQEVHSV FDAFPNVILI LNQHRQVVYC 
NKALVDLLNL EDSSSVLGAR PGEVLNCVHA WENEAGCGTS EHCMSCGAAL AILAGLSGER
ASRECRATVK QQGQFISLDL LFTAKPLTLE GQCFTLVFVT DISHEKRRKF LERIFFHDIL
NTAGSLRGIV ELLGTVKESA QKQELMKDLE EVAGSLIEEI LDQRDLLSAE NNELKVSPEP
FDPVELLNSM MDHYVNHPVA QGITLEVVET LEEATIVSDP ILLKRVLGNM VKNALEASQP
GDVVSLGVKQ IGAEIYFWVN NPREMPRDVQ LQVFKRSFST KGGSRGLGTY SMKLLTERYL
KGSISFTVKE GRGTTFTIRY PLTIRE