Gene Dred_2964 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_2964 
Symbol 
ID4956427 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp3218397 
End bp3218810 
Gene Length414 bp 
Protein Length137 aa 
Translation table11 
GC content44% 
IMG OID640182152 
ProductBadM/Rrf2 family transcriptional regulator 
Protein accessionYP_001114292 
Protein GI134300796 
COG category[K] Transcription 
COG ID[COG1959] Predicted transcriptional regulator 
TIGRFAM ID[TIGR00738] rrf2 family protein (putative transcriptional regulator) 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00065561 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTAA ATCAGGCAAC GGACTATGCA TTCCGTGCAG TTTTATATTT ATCTCGGTTA 
CCGAAAGGAC AAGTGTCAGA GGCCAAAGCA ATTGCCGAGC AAGAGAATAT TCCCATTCGG
TTTTTACTAA AAATTTTACG TTCCCTGACC GCTGCTGGGA TCATTGAATC CTACCGTGGA
GTCAGTGGTG GTTATGCCCT GGCCAGGGAG CCAAAGGACA TTACCATGCT GGATGTGGTG
GAAGCAGTGG AGGGACCAGT AGAGGTGAAC CGCTGTTTAA TTGCGCCGGA AAGCTGTAAC
AAGAATCATA CTGCCAGGTG TCCCATGCAC AGGGCATTAT ATGCTATTCA ACAAAACCTC
AACCAACAAT TAAATAGTTA TAACTTTGCT GACCTTAGTC ATTACAATAA TTAG
 
Protein sequence
MKLNQATDYA FRAVLYLSRL PKGQVSEAKA IAEQENIPIR FLLKILRSLT AAGIIESYRG 
VSGGYALARE PKDITMLDVV EAVEGPVEVN RCLIAPESCN KNHTARCPMH RALYAIQQNL
NQQLNSYNFA DLSHYNN