Gene Dred_2878 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_2878 
Symbol 
ID4955423 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp3123988 
End bp3125922 
Gene Length1935 bp 
Protein Length644 aa 
Translation table11 
GC content49% 
IMG OID640182059 
Productputative molybdopterin biosynthesis protein MoeA/LysR substrate binding-domain-containing protein 
Protein accessionYP_001114207 
Protein GI134300711 
COG category[H] Coenzyme transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0303] Molybdopterin biosynthesis enzyme
[COG1910] Periplasmic molybdate-binding protein/domain 
TIGRFAM ID[TIGR00177] molybdenum cofactor synthesis domain 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAAATA AACGTGATGT ATACCTGGAT AATCGACCCT GGGAAGAAGC CTTGGAAGGA 
CTCCTTAAGC ACTTAGAGGA AAAGGGTTCC CTGGTGCCGG CTGAGCGAGA AGAAATTGCT
GCAGAAGAAT CCCTGGGAAG AGTTACCGCA GAGCCTATTT TTGCCTTTAA TTCGTCTCCC
CATTACAATG CATCGGCTAT GGATGGTATT GCAGTGGACT CTGCCATTAC CTTTGGAGCC
TCAGATGCAA CCCCTAAGAA GATTCAACTG GGAGACAAGG CTCAGATTGT GGATACCGGA
GATCCTATCC CCGCGGCCTG TGATGCAGTA ATTATGATTG AAGATGTTCA CTTTGTGGAA
GAAGATGTTT TTGAAATCAC CTCTGCAGCG GCCCCCTGGC AGCATGTACG GGCCATTGGG
GAAGATGTGG TGGCCACAGA AATGATTTTA CCTGCCAATC ACAAGATTCG ACCCATGGAT
ATTGGGGGTA TCTTGGCCGG GGGAGTCGGC AGAATTAAAG TCCACCCCAA ACCTAAAGTG
GCCTTGCTAC CCACGGGTAC GGAATTGGTT CAACCAGGTA CAGATTTAAA ACCAGGAGAT
ATTGTTGAAT ATAACACCAG GGTCTTTGGT TCGTTGGTTC AAACCTGGGG GGGCGAACCA
TTACGCTGGC CCATTACCAT TGATAACTGG GAGAAGCTAA AACAATCTAT TATGGAAGCG
GTGGAGAAGG CAGATATAGT TGTTATTAAT GCCGGGTCCT CCGCCGGGCG GGAGGACTTC
ACTGCAGAAC TGGTGCGTCA ATTGGGCACA GTGTTAACCC ATGGTGCAGC CATTAAGCCA
GGTAAACCGG TCATACTGGG GGAAATAAAT GGCAAGCCTG TGATTGGCAT TCCGGGATAT
CCTGTTTCGG CTTATCTGGC CATGGAATTA TTTGTCCGTC CAATTATCTA TAAAAAGTTA
GGCTCTGTAG CTCCTAAGCC CGTAGCCGCA GAGGCCATTA TTTCCCGTAA AATGCCTTCA
CCAATGGGTG TAGAGGAGTT TATCCGGGTA AAAATGGGTC AAGTTGGAGA GAAGTTTGTT
GCAACGCCTA TCTCCAGGGG TGCGGGGGTC ATTATGTCCC TTGTTAGGGC AGATGGTATG
TTAAGGGTAC CACGTCTTTC AGAGGGCTAC AGGGCAGGGG ATAACGTTAA GGTTGAACTG
ATGCGGCCCC TGGAGGAGAT TCGCCAGACT ACCGTCATTA TAGGCAGCCA TGATATGGCC
CTAGATGTTT TGGCCAACCA TCTGCGAAGG AAATTTCCAG AAGCCAGCCT TTCCAGTGCC
AATGTTGGAA GTTTGGGAGG ACTCTCGGCC CTTAAGAGAG GTGAGTGCCA CTGTGCTGGT
ACCCACTTAT TGGATGAAGA GACTGGTGGT TACAACGTAA ACTACGTTCA GCGGTTACTA
GGTGATCGTC CTGCAGTTCT GGTCAACCTG GTCTATCGCC AGCAGGGGTT AATGGTGGCA
AAGGGGAATC CCATGAATAT TCAAGGCTTA GAAGACTTAG CCCGGGAAGG TGTACGCTTT
ATTAATCGCC AGCGGGGAGC CGGAACCAGA ATCTTACTGG ATTACCGTTT GAATCAATTA
AATATTGATC CAGACAGTAT TTACGGATAT AACCGTGAAG AGTATACCCA CATGGCTGTG
GCAGCTGCGG TTGCCAGTGG AGCGGCGGAT GCAGGACTTG GTATTTTAGC AGCGGCCAAA
GCCTTGGATC TGGACTTTGT CCCTGTGGTG GAGGAACGCT ATGACCTATG CATTCCCGGG
GAATATTGGG ATACTCCTTA CATTAAACGT TTGCTGGAAG TCATTTCAAC AACGGAATTT
AAGCAGCAAG TGGAAGTGCT GGGTGGCTAT GATTTACGGG ATTGCGGTGG TGTTATGTAT
CGTCAGGGAA TCTAG
 
Protein sequence
MRNKRDVYLD NRPWEEALEG LLKHLEEKGS LVPAEREEIA AEESLGRVTA EPIFAFNSSP 
HYNASAMDGI AVDSAITFGA SDATPKKIQL GDKAQIVDTG DPIPAACDAV IMIEDVHFVE
EDVFEITSAA APWQHVRAIG EDVVATEMIL PANHKIRPMD IGGILAGGVG RIKVHPKPKV
ALLPTGTELV QPGTDLKPGD IVEYNTRVFG SLVQTWGGEP LRWPITIDNW EKLKQSIMEA
VEKADIVVIN AGSSAGREDF TAELVRQLGT VLTHGAAIKP GKPVILGEIN GKPVIGIPGY
PVSAYLAMEL FVRPIIYKKL GSVAPKPVAA EAIISRKMPS PMGVEEFIRV KMGQVGEKFV
ATPISRGAGV IMSLVRADGM LRVPRLSEGY RAGDNVKVEL MRPLEEIRQT TVIIGSHDMA
LDVLANHLRR KFPEASLSSA NVGSLGGLSA LKRGECHCAG THLLDEETGG YNVNYVQRLL
GDRPAVLVNL VYRQQGLMVA KGNPMNIQGL EDLAREGVRF INRQRGAGTR ILLDYRLNQL
NIDPDSIYGY NREEYTHMAV AAAVASGAAD AGLGILAAAK ALDLDFVPVV EERYDLCIPG
EYWDTPYIKR LLEVISTTEF KQQVEVLGGY DLRDCGGVMY RQGI