| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_2246 |
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| Symbol | |
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| ID | 4955381 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum reducens MI-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009253 |
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| Strand | - |
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| Start bp | 2455718 |
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| End bp | 2458819 |
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| Gene Length | 3102 bp |
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| Protein Length | 1033 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640181419 |
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| Product | type III restriction enzyme, res subunit |
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| Protein accession | YP_001113583 |
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| Protein GI | 134300087 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG3587] Restriction endonuclease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.428313 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGTTTC AATTTAAAAT ACAGCAATAT CAAACCGACG CCGTCAACAG CGTGGTCAAT
ATATTTGCCG GACAGCCTTA TATAGACCGT GTCAGCTATG TGCGGGATTT AGGTATAAAA
AAAGCTAAGC AAGAACAAAC CCGTATATTT ATAGAACAGG CCCCGCCGGA GGATGAGGTT
GCAGCGGGCT TTAAGAACGC AGACATTGCC CTGCCCAGTG ACCAACTGCT GCTCAACATT
CGCAACATGC AAGTCCGCAA CAACATTAAA CAGTCCGACA GCTTAGTGAA CCATTTAGGC
AAATGTAGCT TAGATGTAGA AATGGAAACC GGGACAGGCA AAACCTACGT TTACATCAAA
ACCATCTTTG AACTAAATAA GCGCTACGGC TGGAGCAAAT TTATCGTGGT GGTTCCCTCC
ATTGCCATCC GGGAAGGGGT TAAGAAAACC TTTGCCATCA CCCAGGAACA CTTCATGGAG
CACTATGGCA AGAAGGCCCG TCACTTTGTT TACAACAGCA AAAACCTGGC AGAGTTGGAC
AACTTCAGCT CCAGTGCTGG CATCAACGTG ATGATTATCA ACATCCAGGC CTTCAATACT
TCCTTAAAGG AAAATGCCAG AAGTAAAGAA GCCCGCCGTA TCTATGAAGA GCTAGATGAC
TTCGGCAGCC GTCGGCCCAT TGAGGTGATT AAGGCCAACC GACCCATCCT CATTCTGGAC
GAGCCCCAAA AGATGGGTGG CGATAAGACC CAAAAGGCTT TAGCCAACTT CAACCCTCTG
TTCTGCCTCA ATTACTCGGC CACCCACGCC CAGCATCACA ACTTGGTCTA TGTATTGGAT
GCGGTGGATG CCTACAACAA GCGCCTGGTC AAAAAGATCG AGGTCAAAGG CTTTGAGGTT
AAGAACTTGC GTGGGACAAC CCAATACCTG TATCTGGAGA ATATTCTCAT CTCCCCCAAA
AAGCCGCCAA TGGCCAAAAT AGAATTGGAG ATTAAACAAA AATCCGGCAT CAAGCGGGAC
ACCCGCCTTG TTGGGGTAGA TGATAATCTG TACGCCATTT CCAAAGAATT GGAACAGTAC
AAGGGCTATC ATATCAGTGA GATTGATCCC ATTCGGGGTA CGGTCACCTT TACCAACGGC
CATGTTTTGG CCCGGGGGGA AGTGGTGGGG GATGTGTCTG AAAAGGATAT ACGCCGTATC
CAAATACGTG AGACCATTAT CTCCCACTTT GAAAAGGAAA AGCGGCTCTT TGAACTGGGC
ATCAAGACCC TGTCCCTGTT CTTTATCGAT GAGGTGGCTA AGTACCGGGC CTACAACGAG
GCCGGGGAAG AGGTCAACTC CGAGTATGGT GAGATGTTTG AGCAAGAGTA TATTAATATC
TTAAATGAAT ACATCACCCT GGAAGATACC CCCTACATTC GCTATCTTAA GGGCATTGGA
CCCAGCGCCA CCCATACCGG CTATTTCAGC ATCGATAAAC AGGGGCGCAA GGTGGACAGT
GCCATTAAAC GGGGCAAAGA TGAAAGTGAT GACATCAGTG CTTACGACCT GATTCTTAAA
AACAAAGAAC GGCTCCTAAG CTTTGAGGAA CCGGTGCGTT TTATCTTCTC CCACTCCGCC
CTGCGGGAGG GCTGGGACAA TCCCAACGTA TTTCAAATTT GCACCCTCAA GCACGGCGGC
AGCAGCCCCA CCCAAAAGCG CCAGGAAGTG GGCCGCGGTC TGCGCCTCTG TGTCAATCAG
CAAGGGGTGC GCATGGATGC CGAGCGCATC GGCGAGACGG TCCATCATAT CAATATGCTG
ACGGTCATTG CCAGCGAGGG GTACCGGACC TTCGTGGCCG ATTTGCAAAC CGGCATTAAA
GAAGCCCTCT ATGAGCGTCC GGCTAAGGCC TCTATGGAAT ACTTCATGGG TAAAACCATT
ACGGTGGGCG ATCAGACCGT TATTCTGGAT GTCAAGCTGG CTAAGGACAT TTATCGTTAC
TTGCTGAAAA ATGATTATAT CGATGACAAC GATAACGTAA CAAGGGAATA CCGGACAGAT
TTAGCCAACA ACCGCCTGGC GTCTCTGCCG GAATCTCTGG CCCCCCTGGC CGCAGGTGTC
CATACCCTAA TCCAAAGCGT CTTTGATAAG AGTGTGCTGG ATGACATGGT GGAAGATGGC
AATAAGACAA AACTTAAAGA AAATGCCCTC AATGATAATT TCTTTAAGAA GGAATTCCAG
ACACTCTGGA GCTATATTAA CCACCAGTAT GCCTATACCG TGGAGTTCGA TAGCCAGGAG
TTAATAGAAA AGGCCATTAA GCATATCAAT GACAATATGT TTGTTTCCCA GCTGCAATAC
ACCATAGTTA CTGGTAAACA AACGTTGAAT TTGCATGAAG AGGCCATTGC CCGCGGGGAA
AGTTTTCAGC AGGAACATAC CTCTACCAAA ACCCTGCAAC ACGCCGCCGC CAGTCAAATC
AAATACGACT TAATTGGCAA AATTGCCGAG GGTACCACCC TTACCCGACG CACTGTGGCG
GCCATGCTGG CTGGTATCGG TAACCATATC TTTGCCCAAT TTAAACACAA TCCTGAAGAG
TTTATTAGCA AAGCCATCCG GTTAATCAAA GAACAAAAGG CCACCATGAT CGTGGAGCAT
ATCACCTATA ATCAAATAGA AGAACAGTAT GACAGCAGCA TCTTTACCAT GCAAAAGGAC
GAGGGTGATT TTGCCAAAGC CTTCCGGGCC CAGAAACACA TTCAAGACTT CGTATTTACC
GACGGCACCG CCGAAAAGAG TGTAGAGCGG AGGTTTGCCG AGGAACTGGA TTTGGCGGAT
GAGGTTTGTG TCTATGCCAA ACTGCCTAAG GACTTTGCCA TTCCCACCCC CGTGGGCAAT
TACTCCCCAG ACTGGGCCAT TGCCTTTTAT GAAGGGACCG TAAAACACAT TTATTTCATT
GCCGAGACCA AAGGTTCAAT GGAAAGTATG AAGTTACGGG AAATTGAAAA GGCAAAAATA
GACTGTGCCA AGAAACTGTT TAACCAGATA TCCACAAGTC AAGTAAAGTA CCACGATGTG
GACAGTTACC AGAGCCTGCT GGATATTATG AGTAAGCTGT AA
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| Protein sequence | MKFQFKIQQY QTDAVNSVVN IFAGQPYIDR VSYVRDLGIK KAKQEQTRIF IEQAPPEDEV
AAGFKNADIA LPSDQLLLNI RNMQVRNNIK QSDSLVNHLG KCSLDVEMET GTGKTYVYIK
TIFELNKRYG WSKFIVVVPS IAIREGVKKT FAITQEHFME HYGKKARHFV YNSKNLAELD
NFSSSAGINV MIINIQAFNT SLKENARSKE ARRIYEELDD FGSRRPIEVI KANRPILILD
EPQKMGGDKT QKALANFNPL FCLNYSATHA QHHNLVYVLD AVDAYNKRLV KKIEVKGFEV
KNLRGTTQYL YLENILISPK KPPMAKIELE IKQKSGIKRD TRLVGVDDNL YAISKELEQY
KGYHISEIDP IRGTVTFTNG HVLARGEVVG DVSEKDIRRI QIRETIISHF EKEKRLFELG
IKTLSLFFID EVAKYRAYNE AGEEVNSEYG EMFEQEYINI LNEYITLEDT PYIRYLKGIG
PSATHTGYFS IDKQGRKVDS AIKRGKDESD DISAYDLILK NKERLLSFEE PVRFIFSHSA
LREGWDNPNV FQICTLKHGG SSPTQKRQEV GRGLRLCVNQ QGVRMDAERI GETVHHINML
TVIASEGYRT FVADLQTGIK EALYERPAKA SMEYFMGKTI TVGDQTVILD VKLAKDIYRY
LLKNDYIDDN DNVTREYRTD LANNRLASLP ESLAPLAAGV HTLIQSVFDK SVLDDMVEDG
NKTKLKENAL NDNFFKKEFQ TLWSYINHQY AYTVEFDSQE LIEKAIKHIN DNMFVSQLQY
TIVTGKQTLN LHEEAIARGE SFQQEHTSTK TLQHAAASQI KYDLIGKIAE GTTLTRRTVA
AMLAGIGNHI FAQFKHNPEE FISKAIRLIK EQKATMIVEH ITYNQIEEQY DSSIFTMQKD
EGDFAKAFRA QKHIQDFVFT DGTAEKSVER RFAEELDLAD EVCVYAKLPK DFAIPTPVGN
YSPDWAIAFY EGTVKHIYFI AETKGSMESM KLREIEKAKI DCAKKLFNQI STSQVKYHDV
DSYQSLLDIM SKL
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