Gene Dred_2192 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_2192 
Symbol 
ID4958414 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp2397226 
End bp2398092 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content42% 
IMG OID640181368 
Product5,10-methylenetetrahydrofolate reductase 
Protein accessionYP_001113532 
Protein GI134300036 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0685] 5,10-methylenetetrahydrofolate reductase 
TIGRFAM ID[TIGR00676] 5,10-methylenetetrahydrofolate reductase, prokaryotic form 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.723025 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATTT CTACCCTTTA CCAATCCCAA AATCCTGTGA TCTCGTTTGA AATATTTCCT 
CCCAAGAGCA CCTCGCCGGT GGAAACCATC TATGAGACCT TGGAGGGATT AATTAAATTA
GAACCTGGCT TTATTAGTGT TACCTACGGG GCGGGGGGAA GCAGTCGTGA TAGAACCAAG
GAAATCGCTG CAACGATAAA AAACCGGTAT AAAATTGAAG CCCTGGCTCA TTTAACCTGT
GTTGGTCAAG CTGTAAACGA GATTGACCAA ATTCTTAATG AATTACAAGA AGAAAATATT
GAAAATGTAC TGGCCCTAAG GGGTGACCCG CCAGCAGATG CACAAAATTA TGACTTCTCA
GATTCAGATT TTAAATATGC CTCTGATCTG GTTAGGCACA TCAAAAATAG TAGTAATGTC
TGTGTGGCAG CAGCTGCTTA TCCCGAAGGA CACGCCCATT GCCGGCGCTT AAGTGACGAC
CTGAACTGGT TAAAATATAA AGTTGACCAG GGGGTGGATT TCCTTATTAG CCAGCTTTTC
TTTGATAATA GGATATTTTA TAACTTCCTT GAAAATGCCC TAAGAGTTAA TATTCATTGC
CCGGTGGTTG CGGGAATCTT ACCCGTACTT AATGCAAAAC AAATTAAGCG AATTATTTCC
CTATGTGGAG CTTCTATGCC GGCAAAACTC TTGATGCTGG TTGACAAATA TGGCGATAAT
GCAGAAGACA TGGAGAAAGC CGGCATTGAG TATGCCAGCC AGCAGGTTCG TGATCTACTG
GAAAGCGGAG TGGATGGTAT TCACCTTTAT ACCATGAATA AACCACAGCA GGTTACTGAG
ATACTAAAGA ATGTAGGAAA GGCATAA
 
Protein sequence
MKISTLYQSQ NPVISFEIFP PKSTSPVETI YETLEGLIKL EPGFISVTYG AGGSSRDRTK 
EIAATIKNRY KIEALAHLTC VGQAVNEIDQ ILNELQEENI ENVLALRGDP PADAQNYDFS
DSDFKYASDL VRHIKNSSNV CVAAAAYPEG HAHCRRLSDD LNWLKYKVDQ GVDFLISQLF
FDNRIFYNFL ENALRVNIHC PVVAGILPVL NAKQIKRIIS LCGASMPAKL LMLVDKYGDN
AEDMEKAGIE YASQQVRDLL ESGVDGIHLY TMNKPQQVTE ILKNVGKA