Gene Dred_2177 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_2177 
Symbol 
ID4957176 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand- 
Start bp2381161 
End bp2382267 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content43% 
IMG OID640181355 
Productbasic membrane lipoprotein 
Protein accessionYP_001113519 
Protein GI134300023 
COG category[R] General function prediction only 
COG ID[COG1744] Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTAA ACAAAAAGTT TTTTGCACTT GTTTTAACTC TTTTGTTTAC CTTTGCAGTG 
GTGGGGTGTG GCAGTGAAAA ACCACAAGAC CAGGAAGGAA AAAAGGAAGA TAAGTTAAAA 
ATCGGTTTTA TCTATGTCGG TCCGGTGGGT GACGGTGGTT GGAGCTATTC CCATGATGCA 
GGACGCCAGT ATTTAGAAAA GGAAATACCC GGCTTGGAAA CTACTTATAT TGAGTCTGTT 
CCAGAAGGTG CTGATTCCGA ACGTGTTTTA ACTGAACTTG TAGAAAAAGG TAACAAAATT 
ATCTTTGCCA CCAGCTTTGG ATATATGGAT AGCGTTATTA AAGTGGCCCA GAAGTATCCA 
GATGTTAAAT TCCTGCATTG CTCAGGCTAT AAAACCGCTG AAAACGTTGG AACCTACTTT 
GGTCGTATGT ATCAGGCCCG TTATCTGACT GGTGTTTTAG CTGGTGAAAC TACTAAGAGC 
AATGTTATTG GCTACGTTGC CGCATTCCCA ATTCCTGAAG TAATTCGTGG TATTAATGCT 
TTTACTTTAG GGGTTAGATC TGTAAACCCC GAAGCCAAGG TAAAGGTAGT TTGGACCAAT 
ACCTGGTATG ATCCCGCTGC TGAAAAGGAA GCTGGCAAGA GTTTGCTGGA AGCAGGTGCC 
GATGTTGTAA CCCAACACCA GGATACCCCT GGTCCCCAGC AAGCTGCTGA AGAAAAGGGT 
AAGTTTGGCA TTGGTTACAA CAGTGATATG AGTAAAATGG CACCCAAGGC CGTTATGACC 
TCTGCTGTTT GGAATTGGGG ACCCTATTAT GTTGACACTG TAAAAGCAAT TCAAGCAGGC 
ACCTGGAAAA GCGACCAATA TTGGGGACCC ATGTCTGATA ACATTGTTGA TTTAGCACCA 
TATGGTCCGA TGGTTTCTGA CGATATTAAG AAAGTTGTTG AAACTAAAAA ACAAGAGATT 
ATTGAAGGTA AGTTCGATGT ATTTACAGGT CCCATTAAAG ACCAGGCCGG CAAGGAAAGA 
GTTGCTGCTG GACAGAAAAT GTCCGATGCC GATATGCTTT CCCTTGATTG GTTTGTGGAA 
GGTGTAGAGG GTACCATTCC TAAATAA
 
Protein sequence
MKLNKKFFAL VLTLLFTFAV VGCGSEKPQD QEGKKEDKLK IGFIYVGPVG DGGWSYSHDA 
GRQYLEKEIP GLETTYIESV PEGADSERVL TELVEKGNKI IFATSFGYMD SVIKVAQKYP 
DVKFLHCSGY KTAENVGTYF GRMYQARYLT GVLAGETTKS NVIGYVAAFP IPEVIRGINA 
FTLGVRSVNP EAKVKVVWTN TWYDPAAEKE AGKSLLEAGA DVVTQHQDTP GPQQAAEEKG 
KFGIGYNSDM SKMAPKAVMT SAVWNWGPYY VDTVKAIQAG TWKSDQYWGP MSDNIVDLAP 
YGPMVSDDIK KVVETKKQEI IEGKFDVFTG PIKDQAGKER VAAGQKMSDA DMLSLDWFVE 
GVEGTIPK