Gene Dred_2040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_2040 
Symbol 
ID4957910 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp2240851 
End bp2241369 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content45% 
IMG OID640181209 
ProductNADH-ubiquinone/plastoquinone oxidoreductase, chain 6 
Protein accessionYP_001113382 
Protein GI134299886 
COG category[C] Energy production and conversion 
COG ID[COG0839] NADH:ubiquinone oxidoreductase subunit 6 (chain J) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000947304 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGGATA CCAATGTGAT GATAGCCTTT GTCCTGCTGA GCGGGTTGGT CCTGGGTTCT 
GCCCTGCTGG TGGTAACCTT AAAAAACTTG GTACACAGTG TTCTTTGGTT AATTGTTACT
TTTATTGGGG TAGCGGGAAT ATTTCTTTTG CTTAATGCAG ATTTTGTTGC AATGGTGCAA
GTGCTGGTTT ATGCGGGTGC AGTTTGTATC ATGATTGCCT TTGGTGTTAT GTTGGTCCAA
AGACAGGATA TGGAAAACTC TAACCCAATG AACAGCCGTT ATAAAATTGC TTTTCCATTG
ATAGGTGGCC TCTTTATTTC TATTGGTTTA CTAATGGCTA GGACCCGGTG GACCCTCAGT
GGGGAAGCGG TGCCAGAAAA AACTGTGCAA GGCTTGGCAC CGATCCTGTT AACTGATTAT
GTGATTCCCT TTGAAGTGGC GGCTGTTCTG TTGACTGTTG CCCTTACAGG TGCCCTGGTA
TTGGTCAAGG AGGTGAAGGC AAATGGGGAC AGGTCTTAA
 
Protein sequence
MEDTNVMIAF VLLSGLVLGS ALLVVTLKNL VHSVLWLIVT FIGVAGIFLL LNADFVAMVQ 
VLVYAGAVCI MIAFGVMLVQ RQDMENSNPM NSRYKIAFPL IGGLFISIGL LMARTRWTLS
GEAVPEKTVQ GLAPILLTDY VIPFEVAAVL LTVALTGALV LVKEVKANGD RS