| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_1971 |
|---|
| Symbol | |
|---|
| ID | 4957515 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum reducens MI-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009253 |
|---|
| Strand | - |
|---|
| Start bp | 2166780 |
|---|
| End bp | 2167868 |
|---|
| Gene Length | 1089 bp |
|---|
| Protein Length | 362 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 640181138 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001113314 |
|---|
| Protein GI | 134299818 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0628] Predicted permease |
|---|
| TIGRFAM ID | [TIGR02872] sporulation integral membrane protein YtvI |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGCCTGCTT GGCTAAAGAC CGCCCTGAAT TTAGTTTTGG CCGGTCTGCT TCTTTTAGTG
GCGTTCTTTA TTATTGATAA GTTATCCGTT TACTTTGTTA AAGGGGTCTC ATTTATAATA
CCTCTCATTG TCCCCTTTGT TCTGGCAATT TTTATTAGCT TTTTGCTGGA GCCTATGGTG
TATATTCTGC AAAATAAAAT ACATTTTTCC AGGGGACCAG CAGTTGCCCT TTCTATGTTT
TTGCTTATTA TATTTTTTGT TACAATTATT TCATTGTTGC TGTTAAGATT GATTACTGAA
CTTATAAACC TATCTAAAAG TATTCCTTTT ATTATTCAAG AGATTCAGTA TTGGGTCGAA
AAGTCCCTAC CAAAGCTCCA GCAACTATAT GGGGAACTAC CTCCAAGTGT CTCAAATTAT
ATTCAAGAAT CCTTTAGGTC CATAGCGGAT ACATTGCAGA ATCTTTTAGC AGCTGCACTG
GATACGTTGT ATAGTACCTT CTCTGCTGTT CCAGGTTTTA TAACCATCAT TATAGTGAGT
TTTTTGGCAA CCTATTTTAT TAGTAAAGAC AGAAGGTCAT TGGCATTACA TTGGATTAAA
TTTCTTCCTG CACCCTATGG GGAACGAAGT CTACATGTTA TTAAAGAAGT GTTCAATGCT
TTTATCTCCT ACATTAAGGC CCAGGGGATT CTCGTTAGCA TTAGCACTTT TATTAGCATA
TCAGGTTTAT ACATAATAGG GGCAGATTAT GCCCTAACAA TGGGTCTTTT GATTGGCTTT
TTTGATATTA TTCCTGTTTT GGGGCCCGGG ACGGTAATAC TCCCTTGGAT AGTGTGGTCC
ATAATCTCTG GGGAAATAGC TTTTGGCCTA AAATTATTGG TCTTATATAT TGTTATTCTT
GTGGCAAGGC AACTGTTGGA AACGAAGGTT GTGGCGGATA ACCTTGGATT ACATCCCTTA
GCGACTCTGG TGGCATTGTT TTTTGGGTTT AGAATATTAG GCTTTGTAGG AATGATCGTT
GGCCCAATTT TGTTAATTGC CATCCAAGCA ATAGTAAAAG CAGGAATTCA AAGCCCAAGG
GTGAAATAA
|
|---|
| Protein sequence | MPAWLKTALN LVLAGLLLLV AFFIIDKLSV YFVKGVSFII PLIVPFVLAI FISFLLEPMV
YILQNKIHFS RGPAVALSMF LLIIFFVTII SLLLLRLITE LINLSKSIPF IIQEIQYWVE
KSLPKLQQLY GELPPSVSNY IQESFRSIAD TLQNLLAAAL DTLYSTFSAV PGFITIIIVS
FLATYFISKD RRSLALHWIK FLPAPYGERS LHVIKEVFNA FISYIKAQGI LVSISTFISI
SGLYIIGADY ALTMGLLIGF FDIIPVLGPG TVILPWIVWS IISGEIAFGL KLLVLYIVIL
VARQLLETKV VADNLGLHPL ATLVALFFGF RILGFVGMIV GPILLIAIQA IVKAGIQSPR
VK
|
|---|
| |