| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_1919 |
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| Symbol | |
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| ID | 4958017 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum reducens MI-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009253 |
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| Strand | - |
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| Start bp | 2107082 |
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| End bp | 2108620 |
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| Gene Length | 1539 bp |
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| Protein Length | 512 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640181089 |
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| Product | phosphodiesterase |
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| Protein accession | YP_001113265 |
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| Protein GI | 134299769 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1418] Predicted HD superfamily hydrolase |
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| TIGRFAM ID | [TIGR00277] uncharacterized domain HDIG
[TIGR03319] conserved hypothetical protein YmdA/YtgF |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0169953 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGAGTTTC AAATAATTTT AGTGGTTATT ATTTCCGCTT TGGTTGGACT TGTAATTGGT
TTTTTTATTC GAAAGAATAT TGCCGAGGGT AAAATAACAT CGGCTGAAGC CCAGGCTAAG
AGAATTCTTG AAGAGGCTGA GAAGAATGCT GAGGGCAAAA AACGGGAAGC CATTGTTATG
GCAAAGGAAG AAGTTCTAAA ACTACGGAAC GAAATGGAAA GAGAAATAAG GGACCGTAGA
AATGAACTGC AACGGTTAGA AAGAAGGCTT CTGCAAAAAG AGGAGACTCT AGACAGGAAA
ATGGATTCCA TGGAAAAGAA AGAGGAATCC TTAAGTCGCA AAGAAGCTGA CATTGAAAAT
ACCAAGGCTG AGCTTACTAA TGTTTTAAAT CGGCAGTTAG CTGAGTTGGA GCGAGTATCG
GGGCTTTCAT CGGAAGAGGC TCGCCAGATA CTGTTAAATG ATGTGGAGAA AGAGCTTCAA
CACGATATGG CTGTGATGAT TAAAGACTTT GAAAACCGTG CTAAAGAAGA AGCGGATAAG
AAGGCACGGG ACATTATTTC GTCAGCTATT CAAAGATGTG CAGCAGACCA TGTTGCAGAG
GCCACTGTTG CTGTTATACC ATTGCCAAAT GACGAAATGA AGGGTCGTAT AATCGGTAGG
GAAGGTCGTA ATATTCGGGC CTTTGAAACC CTAACAGGTA TTGATTTAAT TATTGATGAT
ACGCCTGAGG CAGTTATCCT TTCAGGTTTT GATCCCATTC GTCGAGAAGT GGCAAGATTG
GCACTTGAAA GGCTAATCTC CGATGGACGT ATACACCCTG CCAGAATTGA AGAGATGGTT
GAGAAGGCTC AGAAAGATGT AGAAGTACAG ATACGTGAAG CAGGTGAACA GGCTACCTTT
GAAACAGGTG TCCATGGCCT TCACCCTGAG CTGGTAAAAC TACTTGGACG TCTGAAGTTT
CGTACCAGTT ATGGGCAGAA TGTCTTAAAA CATTCCATTG AGGTCTGTCA CCTAGCAGGA
CTCATGGCAG CAGAACTGGG TATAGATGTT AAACTTGCGA AACGTGCTGG GTTATTGCAC
GACATTGGGA AAGCTGTTGA CCATGAGGTG GAAGGACCTC ACGTAGCTAT CGGTGTAAAC
CTTTGTCAAA AATATAAGGA AAGTCCAGAA GTTATTCATG CCATCGCAGC ACATCACGGA
GATGAAGAGC CAAGAACCAT AGAAGCTGTC TTGGTACAAG CTGCTGATGC AATATCAGCC
GCACGCCCTG GTGCTAGAAG AGAGACTTTG GAATCCTATA TTAAGCGATT GCAGAAATTG
GAAGAAATTG CAGGCACCTT TGAAGGTGTT GAAAAATCCT TTGCTATTCA GGCAGGAAGA
GAAATCCGAA TTATGGTTAA ACCAGATAAA ATAGATGATC TGGCTGCTAT TCGCCTAGTA
AGGGATATTG CTAAAAAGAT TGAAAATGAA CTGGATTATC CCGGTCAAAT TAAAGTTATT
ATTATTCGGG AAACCAGGTA TGTTGAATAT GCTAAATAA
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| Protein sequence | MEFQIILVVI ISALVGLVIG FFIRKNIAEG KITSAEAQAK RILEEAEKNA EGKKREAIVM
AKEEVLKLRN EMEREIRDRR NELQRLERRL LQKEETLDRK MDSMEKKEES LSRKEADIEN
TKAELTNVLN RQLAELERVS GLSSEEARQI LLNDVEKELQ HDMAVMIKDF ENRAKEEADK
KARDIISSAI QRCAADHVAE ATVAVIPLPN DEMKGRIIGR EGRNIRAFET LTGIDLIIDD
TPEAVILSGF DPIRREVARL ALERLISDGR IHPARIEEMV EKAQKDVEVQ IREAGEQATF
ETGVHGLHPE LVKLLGRLKF RTSYGQNVLK HSIEVCHLAG LMAAELGIDV KLAKRAGLLH
DIGKAVDHEV EGPHVAIGVN LCQKYKESPE VIHAIAAHHG DEEPRTIEAV LVQAADAISA
ARPGARRETL ESYIKRLQKL EEIAGTFEGV EKSFAIQAGR EIRIMVKPDK IDDLAAIRLV
RDIAKKIENE LDYPGQIKVI IIRETRYVEY AK
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