Gene Dred_1789 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_1789 
SymbolpanC 
ID4956554 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp1961498 
End bp1962343 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content45% 
IMG OID640180962 
Productpantoate--beta-alanine ligase 
Protein accessionYP_001113139 
Protein GI134299643 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0414] Panthothenate synthetase 
TIGRFAM ID[TIGR00018] pantoate--beta-alanine ligase
[TIGR00125] cytidyltransferase-related domain 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGACTCT GCAAAACCAT TGAAGAGATT CGTTTGTTAC TAAACACAGT CCGGAATAAA 
GGTAAATATA TTGGTCTAGT GCCAACCATG GGGTTTTTAC ATCAGGGGCA TCTGTCCCTG
GTTCACGAAG CTAAACGACA CTGTGACGTA GTGGTTATGA GTATTTTTGT AAATCCCACC
CAGTTTGGGC CTAACGAAGA TTATGATGCC TATCCCAGGG ACCTGCAACG GGATACAAGT
TTGGCAGCAG AAGCTGGAGT TGATATTATC TTTGCTCCCC CTGCAGAGGA GATGTATCCT
CAGGAATTTA GTAGTTATGT GGATGTAACT GGAGTCAGCG AGTCCCTGTG TGGTGGCTCA
CGGCCGGGTC ATTTTAGGGG AGTAGCCACG GTGGTAACTA AACTATTCAA TATTATACAG
CCCCAAGCTG CATTCTTTGG CCAAAAGGAT TTCCAGCAAG TGTTGGTTAT TAAGCGTATG
GTCGCAGACT TAAACATGCA CGTGAAAATT GTTGACGTTC CAATCATGCG GGAGATTGAC
GGGTTAGCCT TAAGTTCCCG AAATATCTAC CTATCTCCAG AGGAAAGACA GGCTGCTTTG
GTGCTATACC GCAGTCTAAT GCTAGCCCAA GAATTGATAG TCAATGGCGA GCGCGAAATC
CGTCGGATAA AGGAAGCGGT CATCAAGGCT ATTGGTGCGG AACCTAGGGC TAACATTGAT
TACGTGGAAA TACTTTCAAT CCCTAATCTT ACCCCAATTG ATCAGCTAAA AGGAAAAGCC
CTGTTGGCTC TGGCTGTACG TTTTGGAAAA ACAAGATTGA TTGATAATAC TGTTTTGGAG
GCTTAG
 
Protein sequence
MRLCKTIEEI RLLLNTVRNK GKYIGLVPTM GFLHQGHLSL VHEAKRHCDV VVMSIFVNPT 
QFGPNEDYDA YPRDLQRDTS LAAEAGVDII FAPPAEEMYP QEFSSYVDVT GVSESLCGGS
RPGHFRGVAT VVTKLFNIIQ PQAAFFGQKD FQQVLVIKRM VADLNMHVKI VDVPIMREID
GLALSSRNIY LSPEERQAAL VLYRSLMLAQ ELIVNGEREI RRIKEAVIKA IGAEPRANID
YVEILSIPNL TPIDQLKGKA LLALAVRFGK TRLIDNTVLE A