| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_1721 |
|---|
| Symbol | |
|---|
| ID | 4956315 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum reducens MI-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009253 |
|---|
| Strand | + |
|---|
| Start bp | 1880829 |
|---|
| End bp | 1881701 |
|---|
| Gene Length | 873 bp |
|---|
| Protein Length | 290 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 640180896 |
|---|
| Product | inner-membrane translocator |
|---|
| Protein accession | YP_001113073 |
|---|
| Protein GI | 134299577 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.021923 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTTGGAC AGCAGCTACT TAATGGAATA ACATTAGGTG CAACCTATGC GTTAATCGCC
CTAGGTTACA CGATGGTTTA CGGTATTATT CAGTTGATTA ACTTTGCCCA TGGAGAAATC
TATATGGTTG GTGCTTTTGT AGGGGTGTTA ATGGTTACTG TTTTTCAACA GGGGTTAGCT
GCTTCGTTGG TTGCTGCTAT GCTTACCTGT ATGGTTATCG GTGTATCCAT TGAACGCATT
GCTTATCGTC CCCTCCGCAG GTCCACTCGG TTAGCTCCGC TAATTTCTGC CATTGGAGTT
TCTATTTTTC TACAGACATT AATGACAAAG CTCAAAGGTC CACAACCTGT AGGGTTTCCC
CATGTAATTG AAGATGCCAT TTATAAATTT GCTTCAATTG AAATCAGCAA GGTACAGATT
ATTATCTTAG TATTATCCAG CCTACTTATG GCAGGACTAC ATTTTATTGT GAAGTATGTT
AAGATTGGTA AAGCCATGCG AGCTGCTTCG GAAGATTATG ATACGGCAGC GTTAATGGGT
ATAAATGTCA ACAGAGTTAT CTCATTTACC TTTGCTATTG GATCAGCTCT GGCTGCAGCG
GGTGGGGTAC TGGTAGGGAT TTATTTTAAC TCTGTATCGC CGCTAATGGG AGTAACGGTA
GGTTTAAAGG CCTTCTGTGC TGCTGTCTTA GGGGGGATCG GAAGTATACC AGGGGCCATG
TTGGGAGGTT TGTTTTTAGG TGTGGCGGAG ACCCTGGGCG TAGCCGGCGG TTTTGATTTA
TATAAAGACG CCATTGCCTT TACCCTGTTA ATTGTAGTTT TACTTTTCCG GCCCACGGGG
TTGCTAGGAC GGCCAATTCA AAGGAAAGTG TAG
|
|---|
| Protein sequence | MLGQQLLNGI TLGATYALIA LGYTMVYGII QLINFAHGEI YMVGAFVGVL MVTVFQQGLA
ASLVAAMLTC MVIGVSIERI AYRPLRRSTR LAPLISAIGV SIFLQTLMTK LKGPQPVGFP
HVIEDAIYKF ASIEISKVQI IILVLSSLLM AGLHFIVKYV KIGKAMRAAS EDYDTAALMG
INVNRVISFT FAIGSALAAA GGVLVGIYFN SVSPLMGVTV GLKAFCAAVL GGIGSIPGAM
LGGLFLGVAE TLGVAGGFDL YKDAIAFTLL IVVLLFRPTG LLGRPIQRKV
|
|---|
| |