| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_1642 |
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| Symbol | |
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| ID | 4955691 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum reducens MI-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009253 |
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| Strand | + |
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| Start bp | 1791066 |
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| End bp | 1792787 |
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| Gene Length | 1722 bp |
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| Protein Length | 573 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640180818 |
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| Product | ABC transporter, transmembrane region, type 1 |
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| Protein accession | YP_001112995 |
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| Protein GI | 134299499 |
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| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG4987] ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components |
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| TIGRFAM ID | [TIGR02868] thiol reductant ABC exporter, CydC subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAGGT TACACCAATT ACTGAGCTTG CTGCTCCCCC ATTGGCTGCC AATGCTATGG
GCTGTGCTGC TTGGTTTCCT CGCGGTTGGG AGCAATATTG GTTTATTGAC AACCTCGGCC
TATCTGATCT CCAGAGCAGC GCAGCACCCA CCTGTATTGG ACTTGATGGT CGCCATCGTG
GGCGTTCGAT TCTTTGGTAT AGCCAGAGCA GTATTTAGAT ATTTGGAACG GTATTTCTCC
CATGATGTTA CCTTTCGTGT GCTGAGTAAT ATGCGAGTCT GGTTTTACAA AGCCATAGAA
CCCCTGGCCA CCAGCCAATT GATGCACTAC CATAGTGGTG ATTTACTGAG CAGGATTGTT
TCAGATGTTG AGACCCTTAA GAATTTTTAC TTGCGGGTTT TGTCACCGCC CCTGGTGGCC
TTATTAACAT TGGGCGTTGT CTTTTTTTTA TTGGCCTGCT TTGATTTAAG GATGGCCTTT
ATATTCCTGG CTTTTTTTAT TGGGGCGGCA GTGGTTGTTC CAATATTTAT AAGGGCATGG
GGACGCCGGA GCGGACAGGG AATTCTAGGG TCCAAGGCAC AATTAAATAC CTGCCTGGTG
GATGGCATAC AGGGCATGAC GGATCTGTTG TCCTTTGACC AGCAAGGTCG CCAGTTGGAG
AAAATTGATA AGACAAATGA CAATTTATCC AAGCTGCAGG GTCGATTAGC CAAAATCAAT
GGGCTAGCTG GTTCTTTAAC TGGGTTATGC ATGAATCTTG CCATGTGGAC GATCCTGGTA
ATGGCTATAA TAAAGGTGGA GCAAGGGGAA TTACCAGGGG TTTATATTGC TATGCTGGCC
CTTGCTACAT TAAGTGCCTT TGAAGCTGTA ACACCCTTGC CCTTAACCTT TATATACTTA
GAAGAAAGTA TGTCAGCGGC TAAAAGATTA TTTGAACTGG CCGAAACAGA AAACTATTCC
CCCAGCCGTA AGGATGAGCA GTTTGTTCCC AAAGGCTATG AAATAGAGTT TAACAACCTA
CACTTTCGAT ATTCTGCCAA GGATCCATGG ATATTGCGTG ATGTCAGTTT TACAATTCCC
CAGGGACGAC GGCTAGCCAT TGTTGGTCCC AGTGGTGCCG GAAAAAGTAC ACTGGCCAAT
TTATTGCTGG GATTTTTTGA TTACCAGAGG GGGAGTTTGC AACTGGGTGG CAGAGAAGTA
AGGGATTATC ATCAGAGCAA GCTCATGGCA CATATGGCTG TGGTTGCCCA ACGCACCCAT
TTGTTTAATG CCACTGTACG AGAAAATATA TTATTGGCCA GACCCGGGGC CAGTGAAAAG
GAAATGATAC AGGCTGCCCG GCGGGCCAGA ATCCATGATT TTATCCTTAC TTTGCCAGAA
GGTTATGATA CCTATGTGGG TGAGGGCGGC TTAAAGTTAT CTGGTGGACA AAGACAACGT
GTGGCCATAG CCAGGGCTAT TTTAAAGAAT GCTTCGGTGC TGATACTGGA TGAAGTTACT
GCTGGTCTAG ACCCTGTGGT TGGGCGAGAG ATAATGCAGG ATCTTTTTCA ATTGATGAAG
GATAAAACCT CATTGGTTAT CTCACATCAC CTGGTGGGCC TGGAGTGTAT GGATGAAATT
CTTGTGCTTG TGGAAGGAAA GGTGGTCGAA AAAGGCACAC ACTCACAATT ACTGGAACAA
GGTGGCGTCT ATGCTAGAAT GTGGCAATTA TCCGTTAGAT AG
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| Protein sequence | MKRLHQLLSL LLPHWLPMLW AVLLGFLAVG SNIGLLTTSA YLISRAAQHP PVLDLMVAIV
GVRFFGIARA VFRYLERYFS HDVTFRVLSN MRVWFYKAIE PLATSQLMHY HSGDLLSRIV
SDVETLKNFY LRVLSPPLVA LLTLGVVFFL LACFDLRMAF IFLAFFIGAA VVVPIFIRAW
GRRSGQGILG SKAQLNTCLV DGIQGMTDLL SFDQQGRQLE KIDKTNDNLS KLQGRLAKIN
GLAGSLTGLC MNLAMWTILV MAIIKVEQGE LPGVYIAMLA LATLSAFEAV TPLPLTFIYL
EESMSAAKRL FELAETENYS PSRKDEQFVP KGYEIEFNNL HFRYSAKDPW ILRDVSFTIP
QGRRLAIVGP SGAGKSTLAN LLLGFFDYQR GSLQLGGREV RDYHQSKLMA HMAVVAQRTH
LFNATVRENI LLARPGASEK EMIQAARRAR IHDFILTLPE GYDTYVGEGG LKLSGGQRQR
VAIARAILKN ASVLILDEVT AGLDPVVGRE IMQDLFQLMK DKTSLVISHH LVGLECMDEI
LVLVEGKVVE KGTHSQLLEQ GGVYARMWQL SVR
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