Gene Dred_1365 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_1365 
Symbol 
ID4956116 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp1466910 
End bp1468259 
Gene Length1350 bp 
Protein Length449 aa 
Translation table11 
GC content41% 
IMG OID640180542 
Producthypothetical protein 
Protein accessionYP_001112722 
Protein GI134299226 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1488] Nicotinic acid phosphoribosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTATAT TTAATGGAAA AAGATTAGAC AAAAACTTAT TTGCTATTGA TGTCGCTAGA 
ATGCGACAGG GCTGGTATTC AGATGCCTAT TTTATTAATA TTTTTAACAT ATTGCAAGTT
TTGTCACGGG ATAGTTATAC TTTCCAAGGA ATCAGTGATC TTAAAGAAAT AGATACAAAA
TTATTGAAGA CTGGTGATAT TAAGGTTGAA ATGCAGATTT TCACCCGAAG AAGGCCCTTT
AGTCTAATAG CTGGAGTTGA CGAATCACTT GCCATCTTAG AAGAGTGCAC TGGTTATTTT
GATAACAATA ACCACTTTAT TAACACTTAC AAAGAATTAG AAGTTGAGGC TGTTCAAGAC
GGTTCCTTTG CTTCTTACGA TGGCGACCCC TTAAATGTAC AACCTGTTAT AAAAATTCGT
GGACGTTACA GAGATTTCGC TAAACTGGAA ACACCAATCC TAGGGGCCCT CACTGAAGCT
ACTCGGGTTG CCACCAATGT ATACAATGTT CTGGAAGCCA CCAGGGGTAA AGATGTCTTA
TTTTTCCCTG CCCGCTTCGC GCATTATAAA CTACAGGCCC TGCATGGTTA TGCCTATTCA
CTGGCTGTAC AAGCCTACAA TCATAAACAT AATAAAAATT CGGCTACCTT TGTATCCACC
GATGACCAAG GGGATTGGTG GGGCGGCAAA GGTGGGGGGA CCATTGCCCA CTCCTCCATT
GCTTGTTTTC TAGGTGATAC GGCCGAAACA ATGATACAAT TCTCCAGAAT TATTCCTGTG
GAAGTGCCCA GGATCGCCTT GGTAGATTTT CATAACGATT GCGTTGGCGA AACATTAAAG
GTCATGACCA AAATGTTTGA AAAGTACTGG CAGTATTATT CCGAAGGGGA CCTGGAAGAA
GCCAAAAAGT ATAAACTCTT TGCTGTAAGA TCAGATACCT CAGGGAATAT GAGAGATGTA
TCTGTGGAAC CCTTAGGTGA TGAATTGCTT GATCTTGGTG TTAACCCTAG ACTAATATGG
AATTTAAGAA AAGCCATTGA TGGCGCCTAT CTCCTTTGGA ATATACCAGC CTCCGCCAAT
GACCTGGCTA GGCAGTGGTG TCAAGATATA AAAATTGTGG CAACCGGTGG TTTTAATGCT
GATAAAATTA AGAAATTTGA AAAGCTACAA GTACCTATAG ATATCTATGG TGTGGGTTCT
TCCCTGTTAG AGAATTGCTG CAATCATGGT ACCAGCAGTG ATTTTACAGC TGACATTGTT
CAGATTTTTA TTGATGGCCA ATGGTACCCC ATGGCCAAAG TGGGAAGGAA GGTATGTGAC
AATCCAAACT TAGAAAGGAT CAAGGATTAA
 
Protein sequence
MSIFNGKRLD KNLFAIDVAR MRQGWYSDAY FINIFNILQV LSRDSYTFQG ISDLKEIDTK 
LLKTGDIKVE MQIFTRRRPF SLIAGVDESL AILEECTGYF DNNNHFINTY KELEVEAVQD
GSFASYDGDP LNVQPVIKIR GRYRDFAKLE TPILGALTEA TRVATNVYNV LEATRGKDVL
FFPARFAHYK LQALHGYAYS LAVQAYNHKH NKNSATFVST DDQGDWWGGK GGGTIAHSSI
ACFLGDTAET MIQFSRIIPV EVPRIALVDF HNDCVGETLK VMTKMFEKYW QYYSEGDLEE
AKKYKLFAVR SDTSGNMRDV SVEPLGDELL DLGVNPRLIW NLRKAIDGAY LLWNIPASAN
DLARQWCQDI KIVATGGFNA DKIKKFEKLQ VPIDIYGVGS SLLENCCNHG TSSDFTADIV
QIFIDGQWYP MAKVGRKVCD NPNLERIKD