| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_1302 |
|---|
| Symbol | |
|---|
| ID | 4955441 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum reducens MI-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009253 |
|---|
| Strand | + |
|---|
| Start bp | 1392594 |
|---|
| End bp | 1393916 |
|---|
| Gene Length | 1323 bp |
|---|
| Protein Length | 440 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 640180481 |
|---|
| Product | respiratory-chain NADH dehydrogenase domain-containing protein |
|---|
| Protein accession | YP_001112661 |
|---|
| Protein GI | 134299165 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG4656] Predicted NADH:ubiquinone oxidoreductase, subunit RnfC |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGTCAGGCG ATGTGGTGCG GGCAATCCAT GATGCAGGCG TGGTAGGCGC CGGTGGAGCC
GGCTTTCCCA CCCATGTAAA AACTTCGGCG AAGGTTGACT GTGTAATCAT TAACGGAGCA
GAGTGCGAAC CCCTACTGCG GGTAGATCAG CAGTTAATGA GAGACATGCC CCGGAATCTT
TTAAAGGGCT TGTCCATGTT GCTGGACGCG GTGGGTGCCA AACGAGGCGT CATTGCACTT
AAGAAAAAGT ATACCGTCGC CATCGAACAG CTTTCTTCCT GTATAACTGA CCCAAGGATA
GAGATATTTA AGCTGGATGA TTTTTATCCT GCCGGAGACG AACAGGTTAT GGTTCGGGAA
GTAACCGGCA AATCGATACC TGAGGCGGGC ATACCTCTGC AGGTAGATTG TATTGTTAGT
AATGTGGAAA CCGTTTTGAA TGTGGCTGCC TCCCTGGAAG GGCAACCTGT GACAGATACC
TGGTTGACCG TAACAGGTCG AGTAACGGAA CCCTTTACCT GTCAGGCACC AATTGGTACC
TCCAAGCGGG AAATTCTGGC CCAGGCTGGA GTTCAAAAGC AAGAAGGATT GGCCCTGATC
GAAGGGGGGC CGATGATGGG CAAGTTGGTG GAAGATTGGG ATACCCCGGT GACCAAAACC
ACCAAGGGTT TAATTGTTGT GCCGGAGGAT CATCCCTTGG TTACAGCCAG AAAAGCTCCT
CTGGAGGTTT ATTTGCGGCA GGCTCGCTCG GTTTGTATGG GTTGTGCCCG CTGCACCGAG
ATGTGCCCCC GGAATTTATT GGGACATAAC TTACAGCCTC ACCTGATCAT GCGGGCCATG
GCCTATGGCA AGGCAGATTC TCAGGCTATT AAATCCTCTT TGCTTTGCTG CGAGTGTGGA
GTTTGCGAGT ATGCTTGTCC TATGAGATTA TCCCCCAGAT GGGTGAACAC CAGTCTGAAA
GGCCAACTTG TGGCAGCAGG TATTCGCTAT CAGGGTGACG GCACAGAACC AGAAGCTGCC
AAGAGCAGGG ATGAGCGAAA GATTCCGGTT AAGCGTCTTA TTTCTCGATT GGCTCTTAAG
GAATATGACA AACCTGCTCC GGTAAAAGAA TTGGCCAATA AGCCTAAGAA GGTAACCATC
CTGCTACGGC AACATATTGG TGTTCCCTGC CAACCAGTGG TAGAGGTGGG GGACTTGGTG
GAGCGTGGCC AATTAATTGG TGAAATTCCC GAAGGCAAGC TGGGGGCTCG GGTGCATGCC
AGCATTGATG GGGTTGTACT TGAGCAAAAC GTAGCTCAAG TGGTTATCCA GGCACTAGAC
TAG
|
|---|
| Protein sequence | MSGDVVRAIH DAGVVGAGGA GFPTHVKTSA KVDCVIINGA ECEPLLRVDQ QLMRDMPRNL
LKGLSMLLDA VGAKRGVIAL KKKYTVAIEQ LSSCITDPRI EIFKLDDFYP AGDEQVMVRE
VTGKSIPEAG IPLQVDCIVS NVETVLNVAA SLEGQPVTDT WLTVTGRVTE PFTCQAPIGT
SKREILAQAG VQKQEGLALI EGGPMMGKLV EDWDTPVTKT TKGLIVVPED HPLVTARKAP
LEVYLRQARS VCMGCARCTE MCPRNLLGHN LQPHLIMRAM AYGKADSQAI KSSLLCCECG
VCEYACPMRL SPRWVNTSLK GQLVAAGIRY QGDGTEPEAA KSRDERKIPV KRLISRLALK
EYDKPAPVKE LANKPKKVTI LLRQHIGVPC QPVVEVGDLV ERGQLIGEIP EGKLGARVHA
SIDGVVLEQN VAQVVIQALD
|
|---|
| |