Gene Dred_1294 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_1294 
Symbol 
ID4956726 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp1385147 
End bp1386550 
Gene Length1404 bp 
Protein Length467 aa 
Translation table11 
GC content48% 
IMG OID640180473 
Productethanolamine transproter 
Protein accessionYP_001112653 
Protein GI134299157 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0531] Amino acid transporters 
TIGRFAM ID[TIGR00908] ethanolamine permease 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGACA AGAGTTGTAA TGTACAGGCT CAGGAAGGGC AACAGTTAAA AAAGGTTGCA 
GGTCCTTTAC TGCTATGGGG TCTTGGCGTA GGATATGTAA TCTCCGGTGA CTATTTCGGA
TGGAACTTTG GTTTAGCTGC CGGCGGCTTT TGGGGATTAT TCGCTGCTAC CATTTTAATG
GCTATTATGT ATACCAGTAT GTGTTTGACC ATTGCTGAGT TGTCCACTGC TATTCCTTTT
TCCGGTGGAG CCTATGCCTT TGCCAGGCGG GCCATGGGAC CCTGGGGTGG TTACTTGGCC
GGTATTGGGG TTGTATTGGA GTATGTTCTG GCTCCGGCGG TAATTGTTAA CGGTATTGCT
GGTTATGTAC ACGTGTTGTT CCCCGATGTT GCTCAGTGGA TGCTAGTAAT CGGTTTCTTT
GCAGTATTTC TAATTATGAA TACCCTGGGT GCTAAAACTA CTTTGAACTT TGAACTAGTG
GTTACCGCCA TTGCGGTGGT GGGTCTAGGC ATATTTGCCT ACCTAGCCAT TCCACACTTT
GATGCCAGCA AACTGACCAA TATTGCGCCC ACGGAGGGTA ATTCCAAAGT CTTACCCTTT
GGATTAGTTG GTATTTGGGC AGCTATTCCC TATGCCATCT GGTTGTTCCT GGCCATTGAA
GGACTTCCTC TGGTATCCGA GGAGTGTAAA GATCCTGCTA AGGATATGCC TAAGGGACTT
ATTTCTTCCA TTTCAACACT GGTTATCACC GCCTTTTTGG TACTTTTCCT GGCTGCCGGT
AATGGCGGAG CAGACGCCAT GAGTACATCC GCCAGTCCAT TGCCCGAAGC TCTGGCTGGA
GCGCTGGGGC AGGCTCACTG GTCTATGAAA GGCTTGGCAC TGATTGGTTT GGCAGGGCTG
ATTGCCAGCT TTAACGGCAT TATTTTTGGC TACGGCCGGG CCATTTTCTC TCTGTCCCGT
GCTGGTTACC TGCCAAGATT TTTATCTGCT GTTCACCCCC GTTTCCATAC ACCTTATGTG
GCTTTGCTGG TAGGTGGTGC AGTGGGTATT GTCGGTGCTA TTTTGGGTAA CGGTGATGTT
TTGATTCAAA TTGCCGTGTT TGGTGCGGTA ATTTCCTACA TCATGATGAT GCTTTCAGCC
ATTGTTTTGC GGAAAAAGGA GCCTAATATG CCTAGGCCAT ATAAAGTGCC CCTATACCCC
TTAACTCCTT ATGCTGCACT GATACTGGCC ATTATTGCAC TTTTCGCCGG GTTCTTCTAC
GCGCCCAAGG TCATTCTTTG GACTGCTCTG GTTTACGCCA TCTTCGTAGC GTACTTTGCT
TTCTATAGCA GACATCACCT GGTAGCGAAA GCTCCTGAAG AAGAGTTTGA ATTACTGAGA
AAAGCCGAAG AAGAATTAGG TTAG
 
Protein sequence
MSDKSCNVQA QEGQQLKKVA GPLLLWGLGV GYVISGDYFG WNFGLAAGGF WGLFAATILM 
AIMYTSMCLT IAELSTAIPF SGGAYAFARR AMGPWGGYLA GIGVVLEYVL APAVIVNGIA
GYVHVLFPDV AQWMLVIGFF AVFLIMNTLG AKTTLNFELV VTAIAVVGLG IFAYLAIPHF
DASKLTNIAP TEGNSKVLPF GLVGIWAAIP YAIWLFLAIE GLPLVSEECK DPAKDMPKGL
ISSISTLVIT AFLVLFLAAG NGGADAMSTS ASPLPEALAG ALGQAHWSMK GLALIGLAGL
IASFNGIIFG YGRAIFSLSR AGYLPRFLSA VHPRFHTPYV ALLVGGAVGI VGAILGNGDV
LIQIAVFGAV ISYIMMMLSA IVLRKKEPNM PRPYKVPLYP LTPYAALILA IIALFAGFFY
APKVILWTAL VYAIFVAYFA FYSRHHLVAK APEEEFELLR KAEEELG