Gene Dred_1279 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_1279 
Symbol 
ID4958356 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp1365281 
End bp1366048 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content48% 
IMG OID640180456 
Productputative CoA-substrate-specific enzyme activase 
Protein accessionYP_001112638 
Protein GI134299142 
COG category[I] Lipid transport and metabolism 
COG ID[COG1924] Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain) 
TIGRFAM ID[TIGR00241] CoA-substrate-specific enzyme activase, putative 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAACAG CTGGCATTGA TGTGGGTTCA GTTTCCACAA AGGTTGTCCT ACTCATAGAT 
GACGAAATAA AATATTTAGT CCGTCCCACT GGCTGGAGTC CCCGGGATGC CGGTTTGCAT
GCCTATCAAG AATTGTTGGA CTCCGCGGGA TGTAATAATA ATGATGTTAG TGGTGTTGTC
GGTACAGGTT ATGGCCGAAT TTCTTTGCCT ATAATTGATA AAGCCGTAAC AGAAATCCAC
TGTCATGCTA GGGGTGCTAA TTATCTGGTT GGCCAGGGAG GCCTTTTAAT TGATATCGGT
GGCCAAGACA GCAAAGCCAT CCTTATGAAT GAGCGGGGCA AAGTGGTTGA TTTTGCCATG
AATGACAAAT GTGCAGCTGG AACAGGCCGA TTCTTGCAGG TAATTGCAGC TGCCCTAGGG
GTGGATGTCA GTGAGTTGGC AGACTTAGCG GAAAATAGGC AACCCCTGGA TATTAATAGC
ATGTGTACGG TCTTTGCGGA ATCCGAAGTG ATAAGTCTGC TGGCGAAGGG ATCCGATAAG
CGGGATATTA TAGCGGGTAT TCACCGATCT GTGGCAAGAA GGGTCTGGGG CATGGCCAGT
CGCTTTGGAC CAGCCCAATG TGTAATTTTT ACTGGTGGGG TTGCCCAAAA TCATGATGTA
CGTAACCGTT TGTCTCAGGA AGCAGGTTGT CCGGTCATCG TACCGGAAAT TAGCCAAATG
GCCGGCGCAT TGGGAGCAGC ACTGTATGCC AGAGAGTTAA AGAAATAA
 
Protein sequence
MITAGIDVGS VSTKVVLLID DEIKYLVRPT GWSPRDAGLH AYQELLDSAG CNNNDVSGVV 
GTGYGRISLP IIDKAVTEIH CHARGANYLV GQGGLLIDIG GQDSKAILMN ERGKVVDFAM
NDKCAAGTGR FLQVIAAALG VDVSELADLA ENRQPLDINS MCTVFAESEV ISLLAKGSDK
RDIIAGIHRS VARRVWGMAS RFGPAQCVIF TGGVAQNHDV RNRLSQEAGC PVIVPEISQM
AGALGAALYA RELKK