Gene Dred_1217 details

Gene Information

• Locus tag: Dred_1217
• ID: 4955266
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfotomaculum reducens MI-1
• Kingdom: Bacteria
• Replicon accession: NC_009253
• Strand: +
• Start bp: 1294841
• End bp: 1295320
• Gene Length: 480 bp
• Protein Length: 159 aa
• Translation table: 11
• GC content: 42%
• IMG OID: 640180387
• Product: phage baseplate assembly protein V
• Protein accession: YP_001112576
• Protein GI: 134299080
• COG category: [R] General function prediction only
• COG ID: [COG4540] Phage P2 baseplate assembly protein gpV
• TIGRFAM ID: [TIGR01644] phage baseplate assembly protein V

Plasmid Coverage information

• Num covering plasmid clones: 34
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGACCTAA TAAGAGTTGG GCAGATATCA TCAGTGAATC CTGAAAAATG CACCGCAAGA 
GTTATGTTTC AGGATAAATC AGATGTAGTT TCTTATGATT TGCCTGTCAT GGTGAGGGGA 
TCACTAAATA ATAAGGACTA TTGGATTCCG GCTCCGGGTG AGCAAGTAAT CTGTCTATTC 
TTATCCTCTG GCGTTGCCCA GGGATTTGTT TTAGGTTCCA TATATTCCGA AAAGGATAAA 
CCACCGGTTA AAGACAGTAA TAAAAGGCAC ATATCATTTT CCGATGGAAC TAAGATTGAA 
TATGATGCAG CAACTCATAC ATTGACGGTT AATGCTACGG GTCCGGTTAA TATCGTAGCC 
GCTGGCAACG TGAATGTAAC CGGCGATGTT ATAGCCGATG GAATAAGTCT TAAAAAACAC 
ATTCATGACG GTGTTATGGG CGGTAGCTCT AGCACCAATC CTCCTGTTGG AGGTGGTTAA 

 

Protein sequence

MDLIRVGQIS SVNPEKCTAR VMFQDKSDVV SYDLPVMVRG SLNNKDYWIP APGEQVICLF 
LSSGVAQGFV LGSIYSEKDK PPVKDSNKRH ISFSDGTKIE YDAATHTLTV NATGPVNIVA 
AGNVNVTGDV IADGISLKKH IHDGVMGGSS STNPPVGGG