Gene Dred_1216 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_1216 
Symbol 
ID4955263 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp1293821 
End bp1294840 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content42% 
IMG OID640180386 
Productphage late control D family protein 
Protein accessionYP_001112575 
Protein GI134299079 
COG category[R] General function prediction only 
COG ID[COG3500] Phage protein D 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAGACAA GACGCGCACA CCTTGAGCTG TCTTATAACG GCATAAACAT ATCTGCTGAT 
TTGCAGCCGC ATTTAATTAA TTGGACATCG ACCGATAATC TAAGCGGTCA AGCCGATGAT
ATACAGATTA CTTTGGAGGA TCGTGCGCGG TTGTGGATTG GGGACTGGAT GCCTGATAAA
GGTGCAACTT TAAAGGCAAA GATAGTGCAG GAGAATAAAA AGTTCGCTAA TACAAAAGAG
AGCCTTGACC TTGGAACTTT TGAGATTGAT GAGGTAGAGA ATAATTATCC TCCGTCAACA
GTTTCAATGA AAGGTATTTC AATACCTGAA TCATCCTCCC TTAAAGGAGA GGCTAAAAAC
AAAGCGTGGG AAAAAACAAA ACTGTCCGTT ATCGCAAAGG ATATTGCTAA CGGTTCCGGG
GTTAAACTTT TTTATGACAC ATCTGATGAT CCGGATTATG ACCGGATGGA GCAAACGCAG
GAATCTGACC TTGCATTTCT TACTCGGCTT TGTAACGATG CCGGTCTTTG CCTTAAGGTA
ACCGGAACTC AAATAAACAT ATTTGATGAA CAGAAATATG AGCAGCAACC GCCCATTACC
AGAATTATGG TGGGAGAAGG ATTTATAAAA GGCTATCGAT GCAGAACTAC TTTAAACGGG
CTGTATAAAT CGTGTCGGGT AGAGTATTAC GATGCTAATA AAAAACAAAC GATTAAATTC
GTTTTCACAC CACCAAACCC GCCTAAAACA GGACGGGTTT TAGTTATTAA CGAACGTGTT
ACATCGGTGC AAGAGGCAGA AAGACTTGCT AAAAAACGAT TACGTCAAGC TAATAGAGAA
GGCATGACCG TTTCTCTTGA TTTAATGGGC GACGTAAGGT TTGCAGCTGG GGTAACTGTG
AGGCTGGTTG GTTTTGGCGT TTTTGATGGA AATTATATCA TTATCCAAGC AGCCCATAGT
CAGCAAGGAG GCGGCTATGA AACAAAATTA GAGCTGCGTA AATGCTTGGA GGGGTATTAA
 
Protein sequence
MKTRRAHLEL SYNGINISAD LQPHLINWTS TDNLSGQADD IQITLEDRAR LWIGDWMPDK 
GATLKAKIVQ ENKKFANTKE SLDLGTFEID EVENNYPPST VSMKGISIPE SSSLKGEAKN
KAWEKTKLSV IAKDIANGSG VKLFYDTSDD PDYDRMEQTQ ESDLAFLTRL CNDAGLCLKV
TGTQINIFDE QKYEQQPPIT RIMVGEGFIK GYRCRTTLNG LYKSCRVEYY DANKKQTIKF
VFTPPNPPKT GRVLVINERV TSVQEAERLA KKRLRQANRE GMTVSLDLMG DVRFAAGVTV
RLVGFGVFDG NYIIIQAAHS QQGGGYETKL ELRKCLEGY