| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_1130 |
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| Symbol | |
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| ID | 4957728 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum reducens MI-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009253 |
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| Strand | + |
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| Start bp | 1201843 |
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| End bp | 1203186 |
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| Gene Length | 1344 bp |
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| Protein Length | 447 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640180299 |
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| Product | diaminopimelate decarboxylase |
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| Protein accession | YP_001112489 |
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| Protein GI | 134298993 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0019] Diaminopimelate decarboxylase |
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| TIGRFAM ID | [TIGR01048] diaminopimelate decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.153124 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGATTGC TAGGAACTAT GCGTTTTAAT GATAAGCGTC ACTTAGAAAT CGGCGGTTGT
GATACCGTGG AACTGGCAAA AAAGTATGGA ACTCCTTTAT ATGTCATAGA TGAAGCACTA
TTTAGGCAAA ATTGCCAGAA TTATTACAGG TCATTTACCG AAGAATACGG AACGGAAGTA
ATCTATGCAA GTAAAACGTT AAGCAACCTA GCCATTTGTA CAATTGTGGA ACAAGAGGGT
TTAGGTTTGG ATGTGGTATC CGGCGGAGAA TTATTTACAG CAGCCAAAGC ACGTTTTCCA
ATGGAACGGG TATACTTCCA TGGCAACAAT AAATCACCAG ATGAATTACG GTTAGCATTG
GATTATAAAG TTGGTCGTAT TGTAGTTGAT AACCTGTATG AGTTAGAACT GTTAAATGCT
ATTGCAGGTG AAAAGGATAC GAAAGCATCC ATTATTCTCC GTTTAAGTCC TGGGGTAGAG
GCTCATACCC ATGAATATAT TAAGACAGGC CAAATTGACT CTAAATTCGG CTTGGCTATA
GAAAATGGTA TGGCCATGTC CGCTGTAATG CGTAGCCTGG AGTTATCCAA TATTCTTTTA
AAGGGTATCC ACTGTCATAT TGGATCACAG ATTTTTGAGT TGGCATCCTA TGCCCATGCT
GCTGAAGTAA TGATGAACTT TGTCCAGAAA ATTTTCCAAG AAACGGGCTA TTTGGCGGAA
GAGCTTAATC TGGGTGGTGG TTTAGGAATT TACTACTCCG AAGGAGATTA TCCACGTTCC
GTAAAAGAAT ACGCAGATAT TTTAATGAGT GCTGTCAGGG CAAAGGCTGC TGAGTTTGAT
ATACCTGCGC CCAAGGTAAT CGTAGAACCT GGTAGGTCCA TTTCCGGTCC TTCCGGAACA
ACATTGTATC GTATAGGTGC TATTAAGGAC ATTCCTGGCA TTCGAAAGTA TGTGTCCGTT
GACGGTGGGA TGAGTGACAA CCCTCGTCCA GCTTTGTATA AGTCTAAATA TGAAGCCTGT
TTAGCCAACC GTGTGAATGA AGAACCCATT GAGCAGGTTT CTATTGCAGG GAAATGTTGT
GAATCTGGAG ATATGTTGAT CTGGGACATT AAATTGCCGG TAATAACCAC TGGGGATATT
TTGGCAATAT CTTGTACCGG GGCCTACAAT TATTCCATGT CTATGAACTA CAATAGATTA
CCCCGTCCGG CAATGGTTTT GGTGTGTGAG GGTAAAGCAG ATTTGATTGT AAAGCGGGAA
GATTATGCAG ATATCATTCG TAATGATGTG ATGCCCCAAC GGCTATGCAA CTCCCGGATT
AAATTAGCCT CTTCTTCGCG GTAA
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| Protein sequence | MRLLGTMRFN DKRHLEIGGC DTVELAKKYG TPLYVIDEAL FRQNCQNYYR SFTEEYGTEV
IYASKTLSNL AICTIVEQEG LGLDVVSGGE LFTAAKARFP MERVYFHGNN KSPDELRLAL
DYKVGRIVVD NLYELELLNA IAGEKDTKAS IILRLSPGVE AHTHEYIKTG QIDSKFGLAI
ENGMAMSAVM RSLELSNILL KGIHCHIGSQ IFELASYAHA AEVMMNFVQK IFQETGYLAE
ELNLGGGLGI YYSEGDYPRS VKEYADILMS AVRAKAAEFD IPAPKVIVEP GRSISGPSGT
TLYRIGAIKD IPGIRKYVSV DGGMSDNPRP ALYKSKYEAC LANRVNEEPI EQVSIAGKCC
ESGDMLIWDI KLPVITTGDI LAISCTGAYN YSMSMNYNRL PRPAMVLVCE GKADLIVKRE
DYADIIRNDV MPQRLCNSRI KLASSSR
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