Gene Dred_1116 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_1116 
Symbol 
ID4957595 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp1186091 
End bp1187251 
Gene Length1161 bp 
Protein Length386 aa 
Translation table11 
GC content45% 
IMG OID640180286 
Productpolysulphide reductase, NrfD 
Protein accessionYP_001112476 
Protein GI134298980 
COG category[C] Energy production and conversion 
COG ID[COG5557] Polysulphide reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGGAAA ATAAAGGATT GCTTAAAGAA ATTGCTGAAT ATAAGTGGAA GTTTACCATG 
ACACCTGCCC GCAAAGTATT ACTTTTATTG GCCGGCCTTG GCGTAGTGTG TATGCTGTAC
CGCCTAGCCA CAGGGCTGGG TACTTCCACC AACCTGAGTG ATAAATGGCC CTGGGGGCTT
TGGATCGGGT TTGACGTACT GACTGGTGTG GCTCTGGCTG GCGGTGGTTA CGGAACAGCC
ATTATCGTGC ATGTACTGCA CCGTAATAAG TACCATGCCA TTGCTCGCAG TGCCATGTTA
ACTTCCTTAC TGGGTTACCT GTTAGTCATG GCGGGGCTTT TTATGGACAT TGGTCAGTGG
TTTAACTTTT GGCGTCCCTT TGTATCCTGG GGACATTCTT CAGTATTATT TGAAGTGTTC
TGGTGCGTGT CCTGTTACAC CACCGTTCAG GTATTGGAGT TTGGAGAAAT TGTGACGGAA
AAGGTTGGTA CTAAGTACCA TGAGGCCTTT AAGAAAGCGT TACCGGTACT AATGATTATT
GGTATTGTGT TCCCGACGCT ACACCAATCT TCATTGGGTG CACTTTACCT AATTATGGTG
GATAAACTTT ATCCTCTGTG GTGGTCACCC TACATTGGCT TATTATTCTT AATGTCTTCC
TTCTTTGTCG GGCCTGCCAT GATTTGTGTT GAAACAGCAT TGGCTGGCAA AGCCTTTAAC
CACGAAGTAC CCATTCCTGT ATTACGGGGT CTGGTTAGGA TATCCGGGGT ATTCATGGTT
CTTTACCTTG GTTTGAAGCT CTATGATTTG GCTAACCGTG GGGTATTTAA CCTGATGTTT
GAGGGAAATT TAGAAGGGAA CTTGTTCTTG CTGGAAATTA TTCTGGGGAT TATTATCCCG
ATAATTATTG CCTTCAGTGG TATGAGCAAT ACCCGTAGGG GTCTTGTTAC CTTTGGTGTC
TTGGTAAGCG GCGGTCTAAT ATTTAACCGT ATGAACGTTG TCTTTACCGG CATGTCCGCT
GCCATTGGTG GATGGTACTT TCCTTCTATT ATGGAATGGT CTGTGAGTAT TGGTCTAGTC
GCCATCGGCT GCCTGGTATA TTGCTTTATC GTTGAAAATT TTAACATTTT GGAGCATGGG
GAACACAAGG TAATAGCTTA A
 
Protein sequence
MSENKGLLKE IAEYKWKFTM TPARKVLLLL AGLGVVCMLY RLATGLGTST NLSDKWPWGL 
WIGFDVLTGV ALAGGGYGTA IIVHVLHRNK YHAIARSAML TSLLGYLLVM AGLFMDIGQW
FNFWRPFVSW GHSSVLFEVF WCVSCYTTVQ VLEFGEIVTE KVGTKYHEAF KKALPVLMII
GIVFPTLHQS SLGALYLIMV DKLYPLWWSP YIGLLFLMSS FFVGPAMICV ETALAGKAFN
HEVPIPVLRG LVRISGVFMV LYLGLKLYDL ANRGVFNLMF EGNLEGNLFL LEIILGIIIP
IIIAFSGMSN TRRGLVTFGV LVSGGLIFNR MNVVFTGMSA AIGGWYFPSI MEWSVSIGLV
AIGCLVYCFI VENFNILEHG EHKVIA