| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_0944 |
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| Symbol | |
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| ID | 4958158 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum reducens MI-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009253 |
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| Strand | + |
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| Start bp | 1000883 |
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| End bp | 1002223 |
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| Gene Length | 1341 bp |
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| Protein Length | 446 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640180114 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_001112304 |
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| Protein GI | 134298808 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4962] Flp pilus assembly protein, ATPase CpaF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGGTTTAG AGTTTGAAAG CAATGACTGG ACTGAGCAAA CAGAGACCCA GAAGGAAAAA
ATAATTCAGG ACATAGCTAC TCAATTGTCA AAACAGCATC CCCAATTGTT TAGTGGTAAC
TTGAAAGGTT TTGATCCGGC ACCACTGGTT AGGCAAGCTG TCATAACCAG AAAAGATTTG
GCTGCTGGGG AAACTGAGGA AGTTTATCAG GCAATCATGG GACAGATAAC CGGTTACGGT
CCCCTGGCTG AATTTTTCAC CGGATCTGAT GCATTAGAAG TAACAGAAGT AATGATTAAC
CCCACTGCCA ATGGTAATAA AATATTTTAC GGTAAACATG GTCGCCATTG GCCAACAACA
AAGCAGTACT TCAAAGACGC TGAAGAAGTA ACAAGGTTTT GCCAAAAGAT TTGTGAGGAT
GCAGGTCGGC CATTCACTGT TGATTCACCA ATAGTAGATG CCTGGATGAA AGATGGCTCC
CGTATCGCTG TAATGGGCTT TAAAGCAAGC CCCCTTGGTA CAGCGGCAAC CATCCGTAAG
TCTCCCCTAG TTAGGCCACC GATGAAACTT AGTAAGTTAG TGGAATATGA AATGCTGCCT
GATTTTGCAG TTAAACTCAT TGTGGACTTA TTAGTAGGGG GTCAGGCAAA CCTTGCATTT
TGCGGTCGTA CAGACTCTGG CAAAACAACC TTTATGAGGG CATGTGGAGA ATTTATCAAT
CCTGAAGAAC GGGTCATAGT GGCAGAAACC AGTTATGAGC TAGCCTTTCC ACACTTGCCA
AACTGCATAA ATCTAGTGGA AGTTTCTTAT GGCAATACCG TCGTTGTTGC CATGGTAGAC
CTTTGTAAAA CCGTCAACAG GAATAACCCT GACCGAGCAA TGGTAGGTGA GCTTAGAAGT
TCAGAAATCG TTGCAGCGTC TCAAATAGCG GCCTCTACCT CAGGTGGGTT TTGGACAAGC
CTTCACGCTG GTAATGTTTA TGATCTGAGA GGCAGAATTC ACGGCATGTT TTTTGAAGGT
GGCATGAAGC TGGACAAAGA GTTTCTTGAT GATAAAATTC GCTCCATGTT TAATTTCGTG
ATCTTCCTGG ATAAAGACCG AAATAAGAAA CGTACTCTTA TGCAGATCGT CGAAGTAACT
CCCGAAGGAT ATAATTCTGT AATAAGATTT GATACTGAAA CCTACGCTAA AAGCCAAGGA
AAAACAAGAA GATGGCTCTA TGAAAACACC ATCAGTCAAG ATGGCCTGGC CAACCTAGCT
TTCCGGGGTG CCAACATAAC AGAAGACTAC GAAAAGATAA AAAACAAATT CCTTTATGTA
GGAGGAGAAA GTAATGCTTA A
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| Protein sequence | MGLEFESNDW TEQTETQKEK IIQDIATQLS KQHPQLFSGN LKGFDPAPLV RQAVITRKDL
AAGETEEVYQ AIMGQITGYG PLAEFFTGSD ALEVTEVMIN PTANGNKIFY GKHGRHWPTT
KQYFKDAEEV TRFCQKICED AGRPFTVDSP IVDAWMKDGS RIAVMGFKAS PLGTAATIRK
SPLVRPPMKL SKLVEYEMLP DFAVKLIVDL LVGGQANLAF CGRTDSGKTT FMRACGEFIN
PEERVIVAET SYELAFPHLP NCINLVEVSY GNTVVVAMVD LCKTVNRNNP DRAMVGELRS
SEIVAASQIA ASTSGGFWTS LHAGNVYDLR GRIHGMFFEG GMKLDKEFLD DKIRSMFNFV
IFLDKDRNKK RTLMQIVEVT PEGYNSVIRF DTETYAKSQG KTRRWLYENT ISQDGLANLA
FRGANITEDY EKIKNKFLYV GGESNA
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