| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_0523 |
|---|
| Symbol | |
|---|
| ID | 4957448 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum reducens MI-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009253 |
|---|
| Strand | + |
|---|
| Start bp | 564410 |
|---|
| End bp | 566641 |
|---|
| Gene Length | 2232 bp |
|---|
| Protein Length | 743 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 640179703 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001111893 |
|---|
| Protein GI | 134298397 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1404] Subtilisin-like serine proteases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATGATG ACAAACAACG TCCACACCTC TGGATACCCG AGGAAGAAGT AGATCGACTG
AATAATGAAC CACAAGGGCG GAATAAACCA CGGGATGTTA CCCACGGAGA GCACGGGAAG
AAGTTGTCCA GAGCCTTAGA AGCCATTGTT GCTTACTACA AGGAAATGCC TCAGGGGGCA
CTGCCTGAGG ATTTAGTCGT TTTTAAAGTG TTGCTGCCTG AATCAGAAAA ACTTGACAAC
AAGCAGCGCA GGAAATTCTT GGAGGATAAT GGATTAACGG TTAACGCTGT AAAGGATCGG
CGTAATGCAG TGGTGTCCAC CACCCCTCAT TTGTTTCAAC GCTTACGCAA CCGGATTGAA
AACTACAGAG AAAGAGGCAA ATTCACCGAT TTTCAGTACA TTGATGGTTT CGAACCCTTT
ACCGTTAGTG ATAAGCAAGC CAGTGGTATT CGCAGGTTGT TTTTACAAGG AGATAAGCCC
CCAGAGAAGG TAGATATACA ACTGATGCTT ATGCCCAATC TGACGTCTGG CAAATATGAA
AGTGCTATGT CCAAAATGAG GGGTTCCATT GAACAAGTGT GTGGGGAATA TGTTGAGGAC
TTTATTTTAT CTGATGGAAC TCCTGTAGTG CGAACCATTA TACCTTCAAT GGCCATTGAG
TGGATTTCCC AGGATGATTC AGTGTACCGG GTAGAGGAGA CTAAGTTTTT CACGGCTGTT
GAGGGCGAAG AAACAGACAC GTTTCTTCCA ATGTCTCTGG AACTTAATCC GGAGATTGCC
CTCGACGCAT TACCAGTGGT TGTGATTTTG GATACGGGGA TTCAGCTTCC TGAACCACTG
AATCAATTGG TGTTTACCCG CTGGGTTGCT GATGGCGTAA CACCAGGGGA TAACCCGCAT
GGAACAGCGG TGGCGAGTCG GGCCATCTTT GGTACCGATT TAGCTAATCA ACTAATCGAA
AATGATGTGC TAACCCCCAG GGTTCGGGTG CTGGATGCAG TTGTATTGGA TGGTGAGGTA
TCTGATATTG CGTATATGAA AAGGGTACGC AAGGCCGTAG AACAGTTATC GGGTATCTCC
AAGATTTTCA ATATCTCAGC CAATATTAAG GAGTCTCCCA TTGAAGGGGA TGAAATAAGT
ATTACTGGGT ATGAGCTGGA CAACCTTATG CGGTTGCACG ATGTGCAATT CCTTATTTCC
AGTGGTAACC ATAAGGTTTG GCCAACAGCG GATAGTCTTG AAGAAGTGCT AGATGATGAC
GACACCAGAA TTTCTGCTCC AGCTGATTCT ATGTTAGGCA TTACAGTGGG CGCCATTGCT
GGTCGGGAAC ATCCCTTAAG TTTATCGAAG GTGAATGAGA TAGCCCCCTT TAGTCGCAGA
GGACCTGGCT TTGCTGGATT TACAAAGCCT GATCTGGTTT CCTACGGCGG AAATGCTTAT
TATGATGCTG AAGGTAAAAA ATTCGTTAAT GATCGCCGGG CTTTGGTGTT AATACCTAAC
GGTGAGACTC GGTTTGTAGG TGGTACAAGT TTCGCTGCAC CTGTGGTTGC GGGTGACCTT
GCGGTCATTG CGTCACAAAT TCCCGGTGGG GATATCTTGA TGGCGAAGGC ACTGCTTTAT
CACGGAGCAG CTCCCCTATG GGATGATGAT GGGTTGCAAA TAGAAGACCT CGAATTTATT
GCCAATCTCT ATGGCAGAGG CCTATCAGAC CCAGATAGAA GTTTGTTTTC TTCTCCTTCC
CGTGTGACCT TTGTTCGTGC AGGTGAATTG GACCGCTTGA CCAAAGAGCA TGTACGTTTC
CATATGCCCT CGGTTTTAGC AGCTAAACCA GGTAGAAACA CCGCTAGAGT CACCGTAACT
TGTGTATCAA AGCCACCTAT CTACAGGGAT AAGGGTCAAG AATATCTTGG GGCCTTTATT
TCAGCCTCCT TGCATAAGGT TGGTAATGGT GAGAAACTTC CTTCTGTAAA TCCCAAAGGT
GGCTTTGGCA GGCGCAATTG GGATGTTTGC CACCATTTTT GGAACAACTT CTCCAAGTTC
AATGCGGGTG ATTGGCAGGT TTGGTTAGAG CTGAGGACCC GCTGGGATGT AACAAACGAT
GTGAAGATAC CCTATGCAAT GGCCATAACC ATTGAGGATC TGTCCGGGGA TATCGACATT
TATAACGAGA TTTTAAATGA AACCCGTGGA AGATTCATGC CGATGACTTC TATTCATATT
CCAGTTCGGT AG
|
|---|
| Protein sequence | MDDDKQRPHL WIPEEEVDRL NNEPQGRNKP RDVTHGEHGK KLSRALEAIV AYYKEMPQGA
LPEDLVVFKV LLPESEKLDN KQRRKFLEDN GLTVNAVKDR RNAVVSTTPH LFQRLRNRIE
NYRERGKFTD FQYIDGFEPF TVSDKQASGI RRLFLQGDKP PEKVDIQLML MPNLTSGKYE
SAMSKMRGSI EQVCGEYVED FILSDGTPVV RTIIPSMAIE WISQDDSVYR VEETKFFTAV
EGEETDTFLP MSLELNPEIA LDALPVVVIL DTGIQLPEPL NQLVFTRWVA DGVTPGDNPH
GTAVASRAIF GTDLANQLIE NDVLTPRVRV LDAVVLDGEV SDIAYMKRVR KAVEQLSGIS
KIFNISANIK ESPIEGDEIS ITGYELDNLM RLHDVQFLIS SGNHKVWPTA DSLEEVLDDD
DTRISAPADS MLGITVGAIA GREHPLSLSK VNEIAPFSRR GPGFAGFTKP DLVSYGGNAY
YDAEGKKFVN DRRALVLIPN GETRFVGGTS FAAPVVAGDL AVIASQIPGG DILMAKALLY
HGAAPLWDDD GLQIEDLEFI ANLYGRGLSD PDRSLFSSPS RVTFVRAGEL DRLTKEHVRF
HMPSVLAAKP GRNTARVTVT CVSKPPIYRD KGQEYLGAFI SASLHKVGNG EKLPSVNPKG
GFGRRNWDVC HHFWNNFSKF NAGDWQVWLE LRTRWDVTND VKIPYAMAIT IEDLSGDIDI
YNEILNETRG RFMPMTSIHI PVR
|
|---|
| |