| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_0461 |
|---|
| Symbol | |
|---|
| ID | 4956613 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum reducens MI-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009253 |
|---|
| Strand | - |
|---|
| Start bp | 503264 |
|---|
| End bp | 504409 |
|---|
| Gene Length | 1146 bp |
|---|
| Protein Length | 381 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 640179632 |
|---|
| Product | putative hydrogenase cytochrome b subunit |
|---|
| Protein accession | YP_001111832 |
|---|
| Protein GI | 134298336 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG5557] Polysulphide reductase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGTCTC ACGCCCAAGC CCAAAAGTGG AGTTTTAAAA TGACTCCCAC ACGCGTATTA
TTAATGCTGT TATCGGCTGT CGCCGTAGGC GTAATCGTCT TCCGTCTGGT AACCGGCCTT
GGCATGGTTA CAAATCTGAG CGATGAATGG CCCTGGGGTC TTTGGATCGG TTTCGACGTC
CTTTGCGGTG TTGCATTGGC CGGTGGTGGT TATGGTACTG CACTTATCGT ACACGTTCTG
CATAAGGAAT ATTTCCACCC CATCGCCCGT AGTGCTATGT TAACATCCTT AATTGGTTAC
CTGTTGGTAA TGGCTGGTCT GTTCCTTGAT ATCGGCCAGT GGTTTAACTT CTGGCGTCCA
TTCGTATCCT GGGGTCACTC CTCGGTACTG TTTGAAGTTT TCTGGTGTGT TTCCTGTTAC
ACCACTGTAC AAATTCTGGA ATTTGGTGAA ATTGCCACCG AACGGATCGG TACTCAATTC
CATAGTATTT TCAAAAAGGC TCTGCCTGTA TTGATGATTA TTGGTATTAT TTTCCCCACC
CTGCACCAGT CTTCTCTGGG TGGTCTGTAC CTGCTGATGG TTGATAAGCT ATATCCCCTG
TGGTGGTCTC CTATTATCTT CTTCTTTTTC TTGCTGTCCT CTTTCTTTGT AGGACCTGCA
ATGATCTGTG TGGAAACTAC TCTGGCCGGA AAGGCTTATG ATCACTGGGT ACCTATTCCG
GTTTTACAGA AGCTAATCCG TATTTCTGGC TTTGTTATGA TTTTTTATCT GTTATTAAAA
ATCTATGATT TAGTAAGTCG TGGCGTATTT GGACTGATGT TCTCCGGAAC CTTTGAAGCC
AACATGTTCT TAATCGAAAT GATTTTCGGT ATAATTGTGC CCATCATTAT TTGCTTCAGC
GGCTTTAGCG CAACCCGTAA GGGTCTATTT ACCTTCGGTT TACTGGTAAG CTGTGGTGTT
GTTCTAAACC GTATGAACGT TGTTGTGATT GGTATGATTC GCTCAACCGG TGTATCCTAT
GTTCCTTCTA TCTGGGAGTT CATTGTTAGT GCCGGTTTGG TTGCAATGGG TGTGCTGGCA
TACTGCTTTA TCGTAGAAAA CTTCAAAATT CTAGAACACG ATGATCATCA CGGTCAAGCT
GCCTAA
|
|---|
| Protein sequence | MASHAQAQKW SFKMTPTRVL LMLLSAVAVG VIVFRLVTGL GMVTNLSDEW PWGLWIGFDV
LCGVALAGGG YGTALIVHVL HKEYFHPIAR SAMLTSLIGY LLVMAGLFLD IGQWFNFWRP
FVSWGHSSVL FEVFWCVSCY TTVQILEFGE IATERIGTQF HSIFKKALPV LMIIGIIFPT
LHQSSLGGLY LLMVDKLYPL WWSPIIFFFF LLSSFFVGPA MICVETTLAG KAYDHWVPIP
VLQKLIRISG FVMIFYLLLK IYDLVSRGVF GLMFSGTFEA NMFLIEMIFG IIVPIIICFS
GFSATRKGLF TFGLLVSCGV VLNRMNVVVI GMIRSTGVSY VPSIWEFIVS AGLVAMGVLA
YCFIVENFKI LEHDDHHGQA A
|
|---|
| |