| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_0260 |
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| Symbol | |
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| ID | 4956147 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum reducens MI-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009253 |
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| Strand | + |
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| Start bp | 261878 |
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| End bp | 263062 |
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| Gene Length | 1185 bp |
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| Protein Length | 394 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640179426 |
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| Product | peptidase |
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| Protein accession | YP_001111634 |
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| Protein GI | 134298138 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | [TIGR03526] putative selenium metabolism hydrolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTTGAGCA AAGAGCGTAA AGCCACTGTG GTGGAACTGT GCCAAAAACT CATTCGCCAG
CGGAGCTATT CCGGCGAAGA GCAGGGTGTA GTTCAGGTTC TGCAAGAGAA TATGAAGGCC
ATGGGCTTTG ACGAAGTCAC TGTAGACCGC TACGGCAACA TTATTGGCTG CATCAAGGGC
AAGCGGCCGG GCAAAAAGCT ATTGTTTGAC GGACACATTG ACACCGTGCC TGTTACCAAT
GCGGCAGAAT GGCAGCATCC CCCTTTTGAA GCTGAAATTC ACGATGGCAA GATCTATGGC
CGCGGAACCA GCGACATGAA GGGCGCTGTT GCCGCCATGA CCTGTGCCGC TGCCAATTTT
GCAAACGACA CCAACAAAGA CTTTGCCGGT GAAATCTATG TGGCCGGCGT GGTACATGAA
GAATGCTTTG AAGGTGTGGC TGCCCGCGAA ATCAGCAAAT TGGTGCAGCC TGACTATGTA
GTCATCGGCG AAGCAAGCCA GCTGAACCTA AAGATTGGAC AGCGCGGCCG TGCTGAAATC
GTCATTGAAA CCTTTGGCAT CCCCTGCCAC AGCGCCAACC CTAAAAAAGG CGTCAACGCT
GTTTACAAGA TGGCCAAGGT GATTGAGGCC ATTCACACCC TTGTGCCACC CCATCATCCC
GTGCTGGGTG ACGGCATTCT GGAGCTCACC GACATTAAGA GCAGTCCCTA TCCCGGCGCC
TCGGTTGTGC CGGAGTATTG CCGGGCCACC TATGACCGCC GCCTTCTGGT GGGTGAAACC
AAAGAAAGCG TGTTGGCCCC CATTCAGCAA CTTCTTGGTC AGCTGATGGC TCAGGACCCG
GAACTGAAGG TAACGGTCAG CTATGCCGTT GGTGTTGAAA AATGTCATAC TGGCAACGAG
ATTGAGGGCA AACGGTTCTT TCCTGGCTGG CTGTATGAAG AAAATTCTGA TTTTGTGCAG
AGTGTCTTTA GTCAGTTGAA AGAGATGGGC TACAATCCTT CTATTACTCA GTATAACTTT
TGTACCAACG GCAGCCATTA TGCAGGCGAA GCCGGAATCA AGACCTTTGG CCTTGGTCCT
TCTAAAGAAA ATCTGGCGCA CACAGTAGAC GAACATATCG AAATCGATCA GCTTACCAAG
GTGACAGACT GTTACTATGG CGTAATGCAG GCACTGCTGA AATAA
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| Protein sequence | MLSKERKATV VELCQKLIRQ RSYSGEEQGV VQVLQENMKA MGFDEVTVDR YGNIIGCIKG
KRPGKKLLFD GHIDTVPVTN AAEWQHPPFE AEIHDGKIYG RGTSDMKGAV AAMTCAAANF
ANDTNKDFAG EIYVAGVVHE ECFEGVAARE ISKLVQPDYV VIGEASQLNL KIGQRGRAEI
VIETFGIPCH SANPKKGVNA VYKMAKVIEA IHTLVPPHHP VLGDGILELT DIKSSPYPGA
SVVPEYCRAT YDRRLLVGET KESVLAPIQQ LLGQLMAQDP ELKVTVSYAV GVEKCHTGNE
IEGKRFFPGW LYEENSDFVQ SVFSQLKEMG YNPSITQYNF CTNGSHYAGE AGIKTFGLGP
SKENLAHTVD EHIEIDQLTK VTDCYYGVMQ ALLK
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