Gene Dred_0242 details

Gene Information

• Locus tag: Dred_0242
• Symbol: rpsD
• ID: 4957912
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfotomaculum reducens MI-1
• Kingdom: Bacteria
• Replicon accession: NC_009253
• Strand: +
• Start bp: 244618
• End bp: 245244
• Gene Length: 627 bp
• Protein Length: 208 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 640179408
• Product: 30S ribosomal protein S4
• Protein accession: YP_001111616
• Protein GI: 134298120
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0522] Ribosomal protein S4 and related proteins
• TIGRFAM ID: [TIGR01017] ribosomal protein S4, bacterial/organelle type

Plasmid Coverage information

• Num covering plasmid clones: 25
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCAAGAT ACACTGGTCC ACACTGCCGT CAATGTCGGC GTGAAGGCCT GAAACTGTAT 
TTAAAGGGAG ACCGCTGCTA CACCGGGAAA TGTGCAATTG ACCGTCGTAG CTATGCTCCC 
GGACAACATG GTCAAGGTCG TAAGAAGGTT TCTGAATATG GTATTCAGTT ACGTGCAAAG 
CAAAAAGCGC GTCGTATCTA CGGCGTACTG GAAAAGCCTT TCCGTAACTA CTTCGAGCAT 
GCAGAGCGTC AACCCGGTAT TACCGGTGAA AACCTACTGC GTCTGTTAGA GCGTCGCTTG 
GATAATGTAG TTTACCGTCT GGGCCTGGGT GCTTCCAGAG TTGAAGCAAG ACAACTGGTT 
CGTCACGGTC ATTTTACCGT AAACGGTAAG AAGGTAAATA TTCCATCCTT CCAGGTTCGC 
GTAGGAGATG AAATTGCTGT TCGTGAAAAG AGTAAGGCCT CTCCCCGTAT CAAAGAATTA 
GTTGAGAGAG CCGCTGACCG TACTACTCCA GCTTGGTTAG AGTATGATGG GCAGGAAGCT 
AAAGGCAGAG TTATTGCATT ACCCAGCCGG GATCAAATCG ACGCTCCGGT TGAAGAGCAT 
CTAATTGTCG AGCTGTATTC CAGGTAA 

 

Protein sequence

MARYTGPHCR QCRREGLKLY LKGDRCYTGK CAIDRRSYAP GQHGQGRKKV SEYGIQLRAK 
QKARRIYGVL EKPFRNYFEH AERQPGITGE NLLRLLERRL DNVVYRLGLG ASRVEARQLV 
RHGHFTVNGK KVNIPSFQVR VGDEIAVREK SKASPRIKEL VERAADRTTP AWLEYDGQEA 
KGRVIALPSR DQIDAPVEEH LIVELYSR