| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_0187 |
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| Symbol | ispD |
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| ID | 4957290 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum reducens MI-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009253 |
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| Strand | + |
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| Start bp | 202596 |
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| End bp | 203300 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640179348 |
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| Product | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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| Protein accession | YP_001111561 |
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| Protein GI | 134298065 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1211] 4-diphosphocytidyl-2-methyl-D-erithritol synthase |
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| TIGRFAM ID | [TIGR00453] 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.252535 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGGGTAATA TTGTTGCTGT AATTCCTGCA GCGGGCATGG GGAGCCGTAT GGGTACTGAG
GTTAAAAAGC AGTATCTAAA ATTGCAAGAC CGACCTATTT TAGCCCATAC CATTGATGCG
TTAGAACAAG TCCCCGATAT TACAGGTATT GTATTAGTTG TTTCTCCTGG TGAAGAGACC
CTGTGCCAGG AATTGATATT AAAGGGCAAT TTATTTAACA AGATCATGGC GGTGGTACCT
GGTGGTGACC ACCGCCAAAC TTCTGTCTAT CATGGGCTTT GCAGTCTGCC AGGTGATACC
GAACTGGTGG TTATACATGA TGGCGCCAGG CCCTTGGTAC AAAGGGCAGA AATAAGCCAC
ATTATAAAGG AAGCTCGCCG GGTAGGAGCA GCAGCCTTGG CTGTACCGGT GAAGGACACG
GTCAAGCTGG TTAACGATCA AGGATATGTT ATAGCTACGC CTAATCGTGA AAAGCTTTGG
GCAGTTCAGA CGCCTCAGGT ATTTAACTAT GAACTCATTC TCAAGGCACA CCAGGATGCA
CGGGAAAAGG GTGTTTATGC CACTGATGAT TGCGCTTTGG TAGAAGCATT AGGGCAACCA
GTCAAACTGG TGCAAGGAAG TTATGAAAAT ATTAAAATCA CTACACCAGA AGATATGGTT
ATGGCCCAGG CCTTTCTTAA AAGGAGGAAT TGTTGGTGCG AGTAG
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| Protein sequence | MGNIVAVIPA AGMGSRMGTE VKKQYLKLQD RPILAHTIDA LEQVPDITGI VLVVSPGEET
LCQELILKGN LFNKIMAVVP GGDHRQTSVY HGLCSLPGDT ELVVIHDGAR PLVQRAEISH
IIKEARRVGA AALAVPVKDT VKLVNDQGYV IATPNREKLW AVQTPQVFNY ELILKAHQDA
REKGVYATDD CALVEALGQP VKLVQGSYEN IKITTPEDMV MAQAFLKRRN CWCE
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