| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_0010 |
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| Symbol | |
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| ID | 4957752 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum reducens MI-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009253 |
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| Strand | + |
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| Start bp | 17807 |
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| End bp | 18691 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640179158 |
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| Product | pyridoxal biosynthesis lyase PdxS |
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| Protein accession | YP_001111387 |
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| Protein GI | 134297891 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0214] Pyridoxine biosynthesis enzyme |
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| TIGRFAM ID | [TIGR00343] pyridoxal 5'-phosphate synthase, synthase subunit Pdx1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.483005 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCTGAAA AAGGAACATG GACTGTTAAA AAAGGCCTTG CAGAAATGCT TAAGGGCGGA
GTAATTATGG ATGTTACCAC TCCAGAACAA GCAAAAATTG CCGAAGAGGC TGGTGCTTGT
GCTGTAATGG CTTTAGAAAG AGTACCTGCT GATATTAGGG CTGCTGGTGG AGTAGCTAGG
ATGGCAGACC CCAATATTAT ATTACGCATT ATGGATGCTG TAACCATTCC AGTTATGGCA
AAGGCGAGAA TTGGACATTT TGTTGAAGCT CAGATTTTAG AAGCTCTTGG TGCTGATTAT
ATTGATGAGA GTGAAGTTTT AACTCCAGCA GATGAAGTGT TCCATATTGA TAAACACCAA
TTTAAAGTAC CCTATGTTTG TGGCGCGAGA AACCTTGGTG AAGCCCTACG TAGGATCGGT
GAAGGTGCTG CTATGATTCG CACCAAGGGT GAGCCGGGTA CTGGTAATGT TGTAGAAGCT
GTACGTCATA TGAGACAAGT TATGAGCGAA ATTCGGATGG TACATAACAT GCCAAAGGAT
GAACTTATGA CAGCAGCAAA AGAAATGGGA GCTCCCTATG ATCTAGTATT ACAAGTGCAT
GAATTAGGTA AATTACCGGT TGTTAATTTT GCAGCTGGTG GTATTGCAAC TCCTGCAGAT
GCCGCCCTAA TGATGCAATT GGGCTGTGAT GGTATCTTCG TAGGTTCCGG TATTTTTAAA
TCTAATGATC CGGTATCCAG AGCCAAAGCC ATCGTAGCAG CAACCACCCA TTATAATGAT
CCTAAGATAC TAGCTGAAAT ATCTAAGGAT TTGGGAGAAG CAATGCCTGG TATGGAAATC
TCAAGTATTC CTACTGAACA TCGTATGCAG GAAAGAGGAT GGTAA
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| Protein sequence | MAEKGTWTVK KGLAEMLKGG VIMDVTTPEQ AKIAEEAGAC AVMALERVPA DIRAAGGVAR
MADPNIILRI MDAVTIPVMA KARIGHFVEA QILEALGADY IDESEVLTPA DEVFHIDKHQ
FKVPYVCGAR NLGEALRRIG EGAAMIRTKG EPGTGNVVEA VRHMRQVMSE IRMVHNMPKD
ELMTAAKEMG APYDLVLQVH ELGKLPVVNF AAGGIATPAD AALMMQLGCD GIFVGSGIFK
SNDPVSRAKA IVAATTHYND PKILAEISKD LGEAMPGMEI SSIPTEHRMQ ERGW
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