| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_3221 |
|---|
| Symbol | |
|---|
| ID | 5696083 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfococcus oleovorans Hxd3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009943 |
|---|
| Strand | - |
|---|
| Start bp | 3859848 |
|---|
| End bp | 3860933 |
|---|
| Gene Length | 1086 bp |
|---|
| Protein Length | 361 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 641265840 |
|---|
| Product | phosphoserine aminotransferase |
|---|
| Protein accession | YP_001531101 |
|---|
| Protein GI | 158523231 |
|---|
| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1932] Phosphoserine aminotransferase |
|---|
| TIGRFAM ID | [TIGR01364] phosphoserine aminotransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.00000000978624 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGAAAC GTATTTACAA TTTCAACCCC GGACCGGCCG CCCTCCCCTT GAGTGTACTG
GAAGAGATAC AGGCCACTTT TCTTGACTTT GCCGGCACCG GTATGTCCAT CACCGAGGTC
AGCCACCGGT CCAAACCCTT TGACGCCATC ATCAACGACG CCGTGACCCG CGTGAAACGA
CTGCTGGGCA TCGGCGACGA CTTTAAGGTG CTGTTTGTTC AGGGCGGCGC CAGCATGCAG
TTTGCCATGG TGCCCATGAA CCTGCTTCCC GACGGTAAGT CCGCCGACTA CGTGAACACC
GGCACCTGGT CCACCAAGGC CATCAAGGAG ACAAAAATCC TCGGCAAAAC CGTTAACGTG
GCGGCCTCGT CCGAAGACCG GAACTTTGCC TATATTCCAA AGGAACTCTC TCTTGATCCG
AATGCCGCCT ATGTGCACAT CACCTCCAAC AACACCATCA AGGGCACCCA GTGGGCCGAT
TTTCCCGACA CAAAGGGCGT GCCCATTGTC AGCGACATGT CTTCCGATAT TCTGAGCCGG
CCCCTTGACA TGAGCAAATT CGGCCTGATC TATGCCGGGG CACAGAAAAA CATCGGTCCC
GCCGGCGTCT GCATGGTCAT TGTGAAAAAC GACCTTCTGG AAAAAGCCAA CACCGGCCTG
CCCTCCATGC TGGCCTACAA AACCTATGCC GATTCCAATT CCCTGTACAA CACCCCGCCC
TGCTTTACCA TCTACGCCAT TGACCTGGTG CTCAAGTGGC TGGAAGAGAC CATCGGCGGG
CTGGAAAAGA TGGATGCCGT CAACCGGGAA AAGGCGGCCC TGCTCTATGA CCTGTTTGAC
GCCAGCAGCT TTTACAACGG CACGGCCGAT GCCGACAGCC GGTCCCTGAT GAACGTCACC
TTCCGCCTGC CTTCCGAAGA CCTGGAAAAA CGGTTTGTGG AAGAGGCCAC GAAAAACGAT
CTGGGCGGGC TGAAAGGCCA CCGGTCCGTG GGCGGATGCC GGGCCTCCAT CTACAACGCC
ATGTCCATGG AGGGGATTCA GGCCCTGGTG GATTTCATGA AGGAGTTTGA GCGGACAAAC
GGCTGA
|
|---|
| Protein sequence | MSKRIYNFNP GPAALPLSVL EEIQATFLDF AGTGMSITEV SHRSKPFDAI INDAVTRVKR
LLGIGDDFKV LFVQGGASMQ FAMVPMNLLP DGKSADYVNT GTWSTKAIKE TKILGKTVNV
AASSEDRNFA YIPKELSLDP NAAYVHITSN NTIKGTQWAD FPDTKGVPIV SDMSSDILSR
PLDMSKFGLI YAGAQKNIGP AGVCMVIVKN DLLEKANTGL PSMLAYKTYA DSNSLYNTPP
CFTIYAIDLV LKWLEETIGG LEKMDAVNRE KAALLYDLFD ASSFYNGTAD ADSRSLMNVT
FRLPSEDLEK RFVEEATKND LGGLKGHRSV GGCRASIYNA MSMEGIQALV DFMKEFERTN
G
|
|---|
| |