| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_3166 |
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| Symbol | |
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| ID | 5696028 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | + |
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| Start bp | 3794140 |
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| End bp | 3794367 |
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| Gene Length | 228 bp |
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| Protein Length | 75 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641265785 |
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| Product | AbrB family transcriptional regulator |
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| Protein accession | YP_001531046 |
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| Protein GI | 158523176 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01439] looped-hinge helix DNA binding domain, AbrB family |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000000261549 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGAGTCA CCATAAAAGG CCAGGTTACC ATTCCCCGGC ATATTCGCAA AAAACTGGGC
ATCACCCCGG CATCGGAGGT TGATTTTGTC GAGGAAAAAG GCCGTGTCTT TCTGGTAAAG
CAAAAAGAAG AAAAAATCGC GGACCGAACG TTTGCAAAAC TGCGCGGGAT TGCCACGGTT
AAAATGACGA CCGACCAAAT CATGGCCCTG ACAAGGTCTG ACAAATGA
|
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| Protein sequence | MRVTIKGQVT IPRHIRKKLG ITPASEVDFV EEKGRVFLVK QKEEKIADRT FAKLRGIATV
KMTTDQIMAL TRSDK
|
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