| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_3155 |
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| Symbol | |
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| ID | 5696017 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | - |
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| Start bp | 3781940 |
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| End bp | 3783247 |
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| Gene Length | 1308 bp |
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| Protein Length | 435 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641265774 |
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| Product | TRAP dicarboxylate transporter, DctM subunit |
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| Protein accession | YP_001531035 |
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| Protein GI | 158523165 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.655801 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGAAAATC TTATCACCAT CTCCATTGTG ATTGTGTTTG TGGCTGCCAT CCTGGCCGGT
GCCCCCTTGT TTGCCGTCAT CGGCGGCGGC ACGGTCCTGC TTTTCGGCCT GGTGGCCGGG
GAAAGCATTG CCGTGCCGGT GATGGAGATG TGCCGGCTGG CCAACGCACC GGGGTTTATC
GCCATTCCAC TGTTTATCTT TGCCGGCTAC CTTTTTGCGG AGAGCCGGTC CGCGGACCGG
CTGATCCGGT TTTCCGAGGC CCTTACCGGC TGGATTCCCG GTGGCCTGGC CATTGTAACG
GTGGCGGCCT GCACGGTGTT TACCGCCATC ACCGGGGCCA GCGGCATCAC GATTCTTGCC
TGCGGCGGTC TGCTGCTGCC GGCCCTGGTC AACAACCGGT ATTCGGAAGG GTTCTCCCTG
GGCCTGATCA CGGCCTCGGG CAGCTCGGGC GTTCTGTTTG TGCCCAGCCT GCCCATTCTT
ATATACGGCA TGGTCGCCGG GGTGGACATC ACGGAGCTGT TTATTGCCGG TATTCTGCCC
GGCATTCTGA TCGTCTGCCT GCTGGCCGGT TTCGGCGTGG CCTGCGGCAT TGGCCGACAG
GTGCCCACCA CCCCCTTCTC CCTGGCCCGG CTGGGGGCGG CCCTCTGGGA GATCAAGTGG
ATCGCGCCCC TTCCCTTTGT GGTGATCGGT GGCATTTACA CCGGCATCAT CACCGTGGGC
GAGGCGGCAT CGGTGACGGC GGTGTACGCT CTGGTCACCG AGTGCCTTAT CTACCGGGAG
ATATCGGCAA AAAAGCTGGT TACCGTAGCC ATTGACAGTA TGGTCATGGT AGGCGCCATT
TTGATCGTTC TTGCCGTGGC CCTGGGCCTG ACCAATTTCC TGGTGGATGT CCAGGTGCCC
CAGCGCCTGG TGGCGGTGGT TTCCGCCCAT GTTTCCAGCA AGATTCTCTT TCTCCTGCTG
CTCAATATTT TTCTGCTGAT CGTGGGATGC CTGATGGACA TTTTTTCGGC CATCGTCATC
GTGGTGCCCC TGGTGGCGCC GGTGGCCGCA ACCTTTGACA TCGACCCGGT CCACCTGGCC
ATCATTTTTC TGGCCAACCT GGAGATCGGC TACCTGACCC CGCCGGTGGG CATCAACCTT
TTTATCTCCA GCCTGCGGTT TGACATCCCC ATTGTAAGGC TATATCGTAT GGTAATTCCG
TTTCTGGCCC TGCTGGTGGC GGCCCTTCTG CTGATCAGCT ATTTTCCGGC CCTGTCGCTG
TGGCTGGTGG AACTGTCGGG CAAGAGAGTG CCGGTACTTC AATTTTGA
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| Protein sequence | MENLITISIV IVFVAAILAG APLFAVIGGG TVLLFGLVAG ESIAVPVMEM CRLANAPGFI
AIPLFIFAGY LFAESRSADR LIRFSEALTG WIPGGLAIVT VAACTVFTAI TGASGITILA
CGGLLLPALV NNRYSEGFSL GLITASGSSG VLFVPSLPIL IYGMVAGVDI TELFIAGILP
GILIVCLLAG FGVACGIGRQ VPTTPFSLAR LGAALWEIKW IAPLPFVVIG GIYTGIITVG
EAASVTAVYA LVTECLIYRE ISAKKLVTVA IDSMVMVGAI LIVLAVALGL TNFLVDVQVP
QRLVAVVSAH VSSKILFLLL LNIFLLIVGC LMDIFSAIVI VVPLVAPVAA TFDIDPVHLA
IIFLANLEIG YLTPPVGINL FISSLRFDIP IVRLYRMVIP FLALLVAALL LISYFPALSL
WLVELSGKRV PVLQF
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