Gene Dole_3140 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_3140 
Symbol 
ID5696000 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp3768737 
End bp3769450 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content39% 
IMG OID641265757 
Producthypothetical protein 
Protein accessionYP_001531020 
Protein GI158523150 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATGTG ACAAAGGCAC GTACATTGGG CAAATTACTT CTGGGATTGA CGTTCCTTCT 
ACGCTTGCTT TAAAAACCAT TAGTTTTATT AATCAGAATC TACCTGCTTG GCGGGATGAT
CCCGATAGAC CTAAAGAACA GTCCGAAGAC AAACTAAATT TACAGTTGTG TAAGTTTCTT
GACTCTCGTG CCAGACGGGA TTTCCCTATG GTTCGTTTTG ATCATGAAGA ATATCAGACC
GGCATTAGAC GTGTTGATCT TTCTGCATCA CCAGTTGAAA AAGCAATATT TGGTGCAATC
ACTTATACCA TATACGATCC TATTCTTGTG ATCGAAGGCA AAAGACTTCC CGCACCATCC
ACAAACCGTG AAAAAGAATA TGTTATAGGA GACGTAAATA AGAAGAATGG TGGAATTGAA
CGGTTTAAGT TAGGGTTACA CGGTTTCGAC CTAAACATTG CAGTGATTGT AGGCTACGTT
CAAGAGAAAC GCCTTGATCA CTGGTATCAA AAAATTAATG AATGGATTTT GGAACTTGCC
GATGGAACAA AAAAAGGGTC TTGTGTTTGG AATACCGACG AAGTCCTTAA GCAGCTTATG
CAATATAGAA TAACAAGGGT TTCAAGTTGT CAATCAACCC ATAGTCGCAC TGGCAGTAAA
GTAAGTAGCG AGATTAAAAT TCATCACCTT TGGATTGCAA TGGATACAAC TTGA
 
Protein sequence
MKCDKGTYIG QITSGIDVPS TLALKTISFI NQNLPAWRDD PDRPKEQSED KLNLQLCKFL 
DSRARRDFPM VRFDHEEYQT GIRRVDLSAS PVEKAIFGAI TYTIYDPILV IEGKRLPAPS
TNREKEYVIG DVNKKNGGIE RFKLGLHGFD LNIAVIVGYV QEKRLDHWYQ KINEWILELA
DGTKKGSCVW NTDEVLKQLM QYRITRVSSC QSTHSRTGSK VSSEIKIHHL WIAMDTT