Gene Dole_3138 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_3138 
Symbol 
ID5695998 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand+ 
Start bp3767017 
End bp3767610 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content46% 
IMG OID641265755 
Producthypothetical protein 
Protein accessionYP_001531018 
Protein GI158523148 
COG category[K] Transcription 
COG ID[COG5340] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGAAT CTCCAATAAC AATATTCCGG AAGCATGGTG GGCAACTTCG AATGAGTGAG 
GCGCTCTCTC ACGGTGTTAC ACGGTATATG CTCTATTCGC TAAGAGACAA GGGAATCATA 
GAGCAAGTGA CCAGAGGGGT CTATCGGCTG ACGGAGCTGC CTCCGCTCTC CAACCCGGAC 
CTTGTTACAG TAAGCCTTCG GTTCCCTAAT GCCGTTATCT GTCTTATTTC AGCACTGTAT 
TATCATAATA TCACGACCCA GATTCCGCAT TTTGTTTCAG TGGCGGTGCC AAGAAACTCG 
CGAATACCGT CACTCGACTA TCCTCCTGTT CAGGCCCATC GATTCAATGA TGAAGCTTAC 
CGCTCCGGCA TCGAAAATCG TACCATTGAT GGCGCATCAG TAAAAATCTA TGCTCCCGAG 
AAAACCCTGG CCGATTGTTT TAAATTCCGG AACAAAATTG GAATGGATGT TGTTCTTGAA 
GCGCTCAAAC TATATAGAAC CAGGCAACAA TTCAACCTCG AAAAGCTGCT TATGTACGCA 
GAGGTGTGTC GAGTAAAAAA GATTATGGCG CCTTATCTGG AGGCAATGCT TTGA
 
Protein sequence
MKESPITIFR KHGGQLRMSE ALSHGVTRYM LYSLRDKGII EQVTRGVYRL TELPPLSNPD 
LVTVSLRFPN AVICLISALY YHNITTQIPH FVSVAVPRNS RIPSLDYPPV QAHRFNDEAY 
RSGIENRTID GASVKIYAPE KTLADCFKFR NKIGMDVVLE ALKLYRTRQQ FNLEKLLMYA 
EVCRVKKIMA PYLEAML