Gene Dole_3112 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_3112 
Symbol 
ID5695972 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp3730283 
End bp3731692 
Gene Length1410 bp 
Protein Length469 aa 
Translation table11 
GC content57% 
IMG OID641265729 
Producthypothetical protein 
Protein accessionYP_001530992 
Protein GI158523122 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAAAAGT TTTTTGCGCT TTTTATCGTG GCAAATCTTG GGCTGTCCGC CTTTTTCATT 
GACACCTGGC TTACACACAA TCCGGGGTCC CGTGCCATTC CCATGATCAC CCTTTTTGAG
CAGGGCACCC TGAAGATTGA CCGCTACGAG AAGTACACCC TTGATAAAAG CCGGATCAAC
GGCCATTACT ATTCGGACAA GGCCCCGCTT TCCACCTTTA TCACGCTGCC GTTTTACGGG
ATGGCAAGGC TTTCCGGGCT TGAGCATCTG GGGCCGGACC GTTATCCGGC CTATTCCCGG
GCCTATACCC AAGGCCACCG GCCCGTTTAT AATGACACGT TCGTGTTTCC AGGGTTCTGG
GCCTATGCGA CCGGCAGCCT GATGTGCGGC TCCCTGCCGT TTGTACTCAT TCTGACGGCC
GCCGCCTGGA TGGTGAGGCG CGTAAACCCC TCAGTCTCTC CCGTGTGGCT GGTCTGCCTG
CCTTTTTACG GTTCTTTTGT GTTTGTCTAT GCCGGCGCCT TTTTTGGCCA CCTGCTGGCA
GCCCTGTTGC TGCTGCTGTC CTGCATACTG CTAAAGCGGG GACGGCCCCA TTTTTATGCC
GGCCTGCTGC TGGGGGCCGC CTTTCTGGCC GAATACCCGG TGGGCCTTGC CCTTCCCCTG
TGGGCGGTCC TGATTGTTGT CCGGGAAAAG AGCGTAAAAA AGGCAGCGGC CTTTGTGGGC
GGGTTTTTAC CGGGCCTGCT GGCAAACAGT TTTTATGTCT TTATCATCAC CGGCAGTCCT
TTTTCCATGC CTTACAGCCA TGTGAGCCAC GAGGGGTTTG CCCCCATGCG GCAAAACCTG
GGTTTTGGCC TGCCTCAACC GGAGGCGCTC TGGCACCTGC TGGTCTCTCC CTACCGGGGG
CTGTTGTTTT TTGCGCCTTT TCTCGCGGTG GTCCTGGTTG TGTTCCTGTG GCGGAAGGAA
AAGCAACTCG GGACGGTGGC TCTTGACTAC ACCGCCTGGT TTTCAGTCTG TTTTGTGCTG
CTGTTTTCTT CCTACTACAT GTGGGACGGC GGCTACGCCT ATGGCCCCCG GCACCTGATT
CCCGTTGCCG TTCTGCTGAT TTATGAAGGG GTGGTGTGGG TGTCCCGGAC AAAGCAGCCG
CTGCTGTGGT TCTACAGCAT TGCCGCCGCC GGGGTGGGAA TGAGCTGGAT GGCCAAATCC
ACAGTGGCCT TTCTGGCCGA CCCGGCTGTT TCCAATCCGT TTTTTTCAAT CATTGTTCCG
GAATTTACCG CCGGCCGGTT CAACCCGAAT AATCTCCTGA CCATGATGTT CGGCCTGCCA
CCCATGGCCG GGGTCATCGC CTGGCCGCTG CTGTTTGTGG GGTTGATGAT TGTCCTGGAC
CGGGCTTATT CCCGCTATTC CACAAAATAG
 
Protein sequence
MKKFFALFIV ANLGLSAFFI DTWLTHNPGS RAIPMITLFE QGTLKIDRYE KYTLDKSRIN 
GHYYSDKAPL STFITLPFYG MARLSGLEHL GPDRYPAYSR AYTQGHRPVY NDTFVFPGFW
AYATGSLMCG SLPFVLILTA AAWMVRRVNP SVSPVWLVCL PFYGSFVFVY AGAFFGHLLA
ALLLLLSCIL LKRGRPHFYA GLLLGAAFLA EYPVGLALPL WAVLIVVREK SVKKAAAFVG
GFLPGLLANS FYVFIITGSP FSMPYSHVSH EGFAPMRQNL GFGLPQPEAL WHLLVSPYRG
LLFFAPFLAV VLVVFLWRKE KQLGTVALDY TAWFSVCFVL LFSSYYMWDG GYAYGPRHLI
PVAVLLIYEG VVWVSRTKQP LLWFYSIAAA GVGMSWMAKS TVAFLADPAV SNPFFSIIVP
EFTAGRFNPN NLLTMMFGLP PMAGVIAWPL LFVGLMIVLD RAYSRYSTK