| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_3075 |
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| Symbol | |
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| ID | 5695935 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | - |
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| Start bp | 3684707 |
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| End bp | 3686017 |
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| Gene Length | 1311 bp |
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| Protein Length | 436 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641265692 |
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| Product | TRAP dicarboxylate transporter, DctM subunit |
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| Protein accession | YP_001530955 |
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| Protein GI | 158523085 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000000212239 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGGCTTCA TTATATTTGG GCTGATCCTG CTGGCGGTGT TTGGAGAGCC GCTCTTTATT
ATTATCGGCG GCGCGGCATT CGCGAGTTTT TATTTTGCTC TCGACATTCA CCCGGCCACC
CTGTTCACTG ATTTTTACCG GCTCACCACC ATGCCGGTGT TTGTGGCCAT TCCGCTGTTT
ATCTTTTCCG GATACCTGCT GGCCGAAAGC CGGGTGCCGG AAAAGATGCT GCGGTTTACC
AACGCCCTGC TCGGGTGGAT CCCCGGGGGC CTCTGCCTGG TGGCCCTGAT CGCCTGCTCC
ATATTCACCG CTTTTACCGG CGCCAGCGCC ATCACCATTG TGGCCATCGG CACCCTTCTG
TACCCGGCGT TTCTCAAGGA CAATTATCCG GAAAACTTTG CCCTGGGCCT GATCACCACC
AGCGGTAGCC TGGGCACCCT GTTCATGCCC TGCCTGCCCC TGATTCTTTA CGGTGTCATC
GCCAGCCAGC AGACGCCGCT GAACGTGGAA GACATGTTTA TCGCCGGTCT TCTGCCCGGA
GTTCTGCTGC TGGTACTCAT GTGGATATAC TCCTTTCCCT TTGGCCTGAA ATACACCCGG
CGCCAGGGGT TTGCATTCAA AGAGCTGATG GTCGCTACCG TGGACATCAT CTGGGAACTG
CCCCTGCCCT TTTTTATTAT CGGCGGCATT CTGGCCGGCC TCTTTTCCGC CCCCGAGGCC
GCGGCCGTGG CCGCCATCTA TGTGCTGCTG GTGGAGATGT TTATTACGCG GGACATGACC
GCGATCAAGC TGATCGGCGT TATTCGGCGC AGCATGATCA TGAACGGCTC CATCCTGATC
ATCGTGGGCA TGGCCCTGGG GCTGACCGAC GTGTTCGTCA CCCTGGCCGT TCCGGACAAG
ATATTTGCTT TCATCTGCAA CTATGTGACC AACAAGTATG TCTTCCTGCT TCTGCTCAAC
TTCTTCCTGC TGTTTGTGGG CATGAGCATG GATATTTTTT CAGCCTGCGC CATCGTGGTG
CCCATCGTGG TGCCCATTGC CCTCAAATAC GGCGTCGATC CGGTTCACCT GGGCATCATT
TTTCTGGCCA ACCTGGAGCT CGGTTTTGTC ACTCCGCCCA TCGGCATGAG CCTGTTTATC
TCCTCCATCA AGTTTAACAA GTCTTTTCCC ACCATCTTGC GATCGGTGGT TCCGTTTTTT
ATTATTCTGT TGATCGGACT GCTTTTGATA ACCTATGTGC CGGAGCTGTC GCTTTTTCTG
CTTCGGTTTA CCGCAAAAAA GAATTTGATT GATCCGATGG ATCTTTTATA A
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| Protein sequence | MGFIIFGLIL LAVFGEPLFI IIGGAAFASF YFALDIHPAT LFTDFYRLTT MPVFVAIPLF
IFSGYLLAES RVPEKMLRFT NALLGWIPGG LCLVALIACS IFTAFTGASA ITIVAIGTLL
YPAFLKDNYP ENFALGLITT SGSLGTLFMP CLPLILYGVI ASQQTPLNVE DMFIAGLLPG
VLLLVLMWIY SFPFGLKYTR RQGFAFKELM VATVDIIWEL PLPFFIIGGI LAGLFSAPEA
AAVAAIYVLL VEMFITRDMT AIKLIGVIRR SMIMNGSILI IVGMALGLTD VFVTLAVPDK
IFAFICNYVT NKYVFLLLLN FFLLFVGMSM DIFSACAIVV PIVVPIALKY GVDPVHLGII
FLANLELGFV TPPIGMSLFI SSIKFNKSFP TILRSVVPFF IILLIGLLLI TYVPELSLFL
LRFTAKKNLI DPMDLL
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