| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_3052 |
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| Symbol | |
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| ID | 5695912 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | - |
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| Start bp | 3658944 |
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| End bp | 3660107 |
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| Gene Length | 1164 bp |
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| Protein Length | 387 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 641265669 |
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| Product | twitching motility protein |
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| Protein accession | YP_001530932 |
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| Protein GI | 158523062 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2805] Tfp pilus assembly protein, pilus retraction ATPase PilT |
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| TIGRFAM ID | [TIGR01420] pilus retraction protein PilT |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGAGAG CGGAAGTCGA CCATATTTTA ACAAGGCTGC TGGACTCGTA CGAAAATGTG
TCCGACATCA ACCTCACCGT GGGCAAACCG TTCCAGGTGG AGAGCTCCGG CGAGCTGATC
GCCGTGGACA TCGGCGACGG CTACAGGCCG CTGACCCCTT TCCAGACAGA GTCCTTTGCC
CTGACCCTGA TAGAAGGCGA CCGGCGACTC AACGAAATGC TGCTCCACTA CGGCTCCTGC
GACCTCTCCT ACGCGCTGCC CGGCAAGGCC CGTTTCCGCG TAAACGTGTT TTCCCAGTCC
GGGCAGTACT CCATCGTGCT GCGGCGCCTG GAGTCCACCA TTCCCACCAT TGAAAGCCTG
GAATTGCCGC CCATCTTCCA GGAGATGTCA AAAGAGCTCA ACGGCATCAT TTTCTTTACC
GGCGCCACCG GTACCGGTAA ATCGACCTCC CTTGCCGCCA TCCTTGAAGA GATCAACGAG
AAACGGTCCG TGCATGTGGT GACCCTGGAA GACCCGGTGG AGTACATGCA TCCCCATAAA
AAGGCCACCT TCAACCAGCG GGAGCTGGGC ACCGATTTTG ACACCTTCAT CAACGGCCTG
CGGGCCGCCC TGCGCCAGGC CCCCAAGGTC ATTCTGGTGG GCGAAATGCG GGATAAGGAG
TCCATCGAGA TCGGCCTGCG GGCCGCCGAG ACCGGCCATC TGGTGCTTAC CACCCTGCAC
ACGGTGGATG CCGGCCAGAC CATCAACCGT ATTCTGGGCA TGTTCGACGT GGACGAGGAG
CAGCAGATTC GTATTCGACT GGCCGAGACC CTGCGGTGGG TGGTGTGCCA GCGGCTGCTG
CCCAAGGTGG GCGGGGGCCG GGTGGCAGCC TTTGAGATTC TGGGTACCAA CCTGCGGGTC
AAGGACACCA TTTTGAACGG CGAGGGCGAA GGCCGCACCT TTTACGAAAT TATCAAGCAG
AACGAGGCGT TTGGTTATGC CACCTTTGAT GACTACATCA TCAATCTATA CTCAGAGGGG
CTTATCACCG AGGATGTGGC CAAGGGCTAC GCCTCACGCC GGGGCGTTGT GGGCCGGGGT
ATTGACCAGG TGAAAAGCTC CAGGGGCGAG GCCACCACCG AGATTGAACA CCTGGAAATT
GACCGCAAGT ACGGCAAAGC ATAA
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| Protein sequence | MQRAEVDHIL TRLLDSYENV SDINLTVGKP FQVESSGELI AVDIGDGYRP LTPFQTESFA
LTLIEGDRRL NEMLLHYGSC DLSYALPGKA RFRVNVFSQS GQYSIVLRRL ESTIPTIESL
ELPPIFQEMS KELNGIIFFT GATGTGKSTS LAAILEEINE KRSVHVVTLE DPVEYMHPHK
KATFNQRELG TDFDTFINGL RAALRQAPKV ILVGEMRDKE SIEIGLRAAE TGHLVLTTLH
TVDAGQTINR ILGMFDVDEE QQIRIRLAET LRWVVCQRLL PKVGGGRVAA FEILGTNLRV
KDTILNGEGE GRTFYEIIKQ NEAFGYATFD DYIINLYSEG LITEDVAKGY ASRRGVVGRG
IDQVKSSRGE ATTEIEHLEI DRKYGKA
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