Gene Dole_2948 details

Gene Information

• Locus tag: Dole_2948
• ID: 5695807
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfococcus oleovorans Hxd3
• Kingdom: Bacteria
• Replicon accession: NC_009943
• Strand: -
• Start bp: 3542127
• End bp: 3542825
• Gene Length: 699 bp
• Protein Length: 232 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 641265564
• Product: hypothetical protein
• Protein accession: YP_001530828
• Protein GI: 158522958

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.000084349
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCGCTG CGCAGCCAAA GCCTAAAATC ATTACAACAA TCGAGGAAAG TCAAAATAAT 
AAGATTGGGA CATGGAAAGA CAATCAAGAC GTTGTCCATG GGTTACAATT TAGTGCGACT 
TTGCAGCTTC GCACCCCGCT ACGTGTGTTG CTGCGGCATG GCGAAATCCA CACGAATATA 
AACACGAAGC CGCCCAAAAT CATAAAGGAG ATGTGGGAAG GCATCTGGGT TTTTAAAACA 
AAAACGTTTC GAGAACTTGG CTGTGATGTA GATGAAGTGG CACCGGGAAC ACATGCGTCT 
GATGTGGGGC TGGTTTTGCC TGCTGATTAT TTGCCTTTTC TTATTGCCAT CAGGAGAGTT 
GTTGAACTCG ATGAACCTAT TGAAAACCGC ATCAAAAAAT TACGTGAGAT GCCTATGGCG 
AGCGACTGGA AAACATATAT AGAAAAGCAT GGTGGTATAG AAAAAATTAT CAGACAATTT 
TTCCCGGAAT TTATCGACAC AATTCCCAAG ATTAGCGCGG CAATTGATGA GTTATCCGAA 
TTGGGCTTAG AGACCCCGAA CCGCATTGCA GCCGCACCTG ATGAAACGCT GCTTAGCATC 
AAAGGTATCG GACAATCAAA GCTAAAGACA ATTCGTGACT ACTGCGCTGG CATAACAAAG 
AACCGCGACG CCGATAGAGT TGAGAACGTG ATTAGGTAG 

 

Protein sequence

MSAAQPKPKI ITTIEESQNN KIGTWKDNQD VVHGLQFSAT LQLRTPLRVL LRHGEIHTNI 
NTKPPKIIKE MWEGIWVFKT KTFRELGCDV DEVAPGTHAS DVGLVLPADY LPFLIAIRRV 
VELDEPIENR IKKLREMPMA SDWKTYIEKH GGIEKIIRQF FPEFIDTIPK ISAAIDELSE 
LGLETPNRIA AAPDETLLSI KGIGQSKLKT IRDYCAGITK NRDADRVENV IR