| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_2884 |
|---|
| Symbol | |
|---|
| ID | 5695742 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfococcus oleovorans Hxd3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009943 |
|---|
| Strand | + |
|---|
| Start bp | 3469171 |
|---|
| End bp | 3470094 |
|---|
| Gene Length | 924 bp |
|---|
| Protein Length | 307 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641265499 |
|---|
| Product | cation diffusion facilitator family transporter |
|---|
| Protein accession | YP_001530764 |
|---|
| Protein GI | 158522894 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1230] Co/Zn/Cd efflux system component |
|---|
| TIGRFAM ID | [TIGR01297] cation diffusion facilitator family transporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGTCATA ACCATTCTCA CAGCCATGAA ACAACCATGG GCAGCCGCCT GCTGATGGCC
ATGGCCATCA ACCTGCTGAT TCCGGCGGCC CAGATCGCCG GCGGCATCGT GGCCGGCAGC
GTGGCCCTGA TCTCCGACGC CGTGCATAAC CTGGGAGACT TTGCCTCCCT GGTGGTGGCC
TACGGGGCCC ACCGGGCCGG CAGGCGGGGG CCCTCCCTGC GCCACTCCTT TGGCCTGCAA
CGCATGGAAA TCCTGGCCGC CGTGATCAAT TCGGCCCTGC TGGGCGGCGC GGCCCTGTTC
ATCGCAACAG AAGCCCTGGA TCGACTGGCC AATCCGCAGC CCATTCGCCT GGGTATCGTG
GCATGGCTGG CCCTGGCCGG ACTGGCGGGC AACGGCCTGT CGGCCTGGCT CCTGCACAGG
GATTCGGCGC GCAACCTCAA CGCCAGGGGC GCCTTTCTGC ACATGGTGGG CGACACCCTC
ACCTCCGCGG CAGTGCTGAC CGGCGCCCTG GTCATGCGAG TGGCGGATAT GCCATGGCTG
GACCCGGCCC TGAGCCTGGC CATCGTGGCC TATATCGCCT GGAACGCGGT CCTGCTGCTC
AAAGAGGCGA CACATGTGCT GATGAACGGC ACACCCCGGG GGCTGGACCT GGAAAAGGTC
AGGGCCGACA TGGAAGCGGT GGACGGTGTT CTGAGCGTTC ACTACCTGCA TGCATGGGCC
ATGGGCGGCT GTTCCGTTGC CATGACCGGC CATGTGGTGG TGACCGACCA GATGGTCAGC
GCCACCGAAC AACTGGCCCG CACCCTGGGC GACAGGCTGC TGGACGGCTT CGGCATCGAC
CACCCGGTGT TTCAGTTTGA AACGCGGGTC TGCGGCCAGG GGGAACTGCT CTGCCAGATG
ACATCCTGTG AACAGGAACA CTGA
|
|---|
| Protein sequence | MGHNHSHSHE TTMGSRLLMA MAINLLIPAA QIAGGIVAGS VALISDAVHN LGDFASLVVA
YGAHRAGRRG PSLRHSFGLQ RMEILAAVIN SALLGGAALF IATEALDRLA NPQPIRLGIV
AWLALAGLAG NGLSAWLLHR DSARNLNARG AFLHMVGDTL TSAAVLTGAL VMRVADMPWL
DPALSLAIVA YIAWNAVLLL KEATHVLMNG TPRGLDLEKV RADMEAVDGV LSVHYLHAWA
MGGCSVAMTG HVVVTDQMVS ATEQLARTLG DRLLDGFGID HPVFQFETRV CGQGELLCQM
TSCEQEH
|
|---|
| |