Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dole_2855 |
Symbol | |
ID | 5695713 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfococcus oleovorans Hxd3 |
Kingdom | Bacteria |
Replicon accession | NC_009943 |
Strand | + |
Start bp | 3441341 |
End bp | 3442009 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 641265470 |
Product | TPR repeat-containing protein |
Protein accession | YP_001530735 |
Protein GI | 158522865 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00000189993 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCAAAA TCAGTCGCAT CTCCCTTGAG AGAAAACGGG AACTTGAAGA GCCGGACAAA TTCATGGTGT TTGTGGCAAG AGCCATGCAG CTTGCCCAGA CCTACAGAAA ACAGATCACC GCCATTATCG GCCTGGTGAT CGCGGTGGCC GTGGTAACCG GCGGGGTGTT CTACCTCGGC GCCCGGGCCG AGGTCAAGGC ATCGGATATG CTGGCTTCGG CCACGGCCCG GGCGGACGCC GCCGGGGCCG GCAGCACGGA TGAGTACAGG GCGGTTTACG AAACATACCC GCGCACCGTT GCCGGGCAGA TTGCCGGACT CCGTTATGCG GAACAGCTCT ACCGGTCCGG GGAAGCGGCG GCCGCCGTTG ATGTCTATAC AAAACTCGTT AAAAGCGTGG CCGGCAAACC GACCCTTCAC CACCTGGCCT TAAACGGTCT CGGCTATGCC CATGAAGCGG CCGGGGATCT GAAGGCCGCC GCCGACTGCT TTGAAACCAT CGCGGCCACA CCTGTGTCCG CCCACAAGGA GACGGCCCTC TTCAACCTGG CCCGCCTCTA TGAACAGGTG GGGGAAACGG AAAAAAGCCA AAAGGCCTTC GCTCAAATCG TGTCCGAATA CCCGGACTCC ATGTACGCGG ACATTGCCAG GGAAAAAAGC GCTTCCTGA
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Protein sequence | MAKISRISLE RKRELEEPDK FMVFVARAMQ LAQTYRKQIT AIIGLVIAVA VVTGGVFYLG ARAEVKASDM LASATARADA AGAGSTDEYR AVYETYPRTV AGQIAGLRYA EQLYRSGEAA AAVDVYTKLV KSVAGKPTLH HLALNGLGYA HEAAGDLKAA ADCFETIAAT PVSAHKETAL FNLARLYEQV GETEKSQKAF AQIVSEYPDS MYADIAREKS AS
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