Gene Dole_2798 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_2798 
Symbol 
ID5695655 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp3374604 
End bp3377150 
Gene Length2547 bp 
Protein Length848 aa 
Translation table11 
GC content61% 
IMG OID641265412 
Productpenicillin amidase 
Protein accessionYP_001530678 
Protein GI158522808 
COG category[R] General function prediction only 
COG ID[COG2366] Protein related to penicillin acylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000130023 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACCG GTTCTTTAAC CCGTACCTGC CGGATCTGCG TGCCTGTGAT GACCGCCCTG 
CTCCTCTGCC TGGCCACCAC CGGCTGCGCC CCGCTGCTCA ACAGCGTCTT TGACAACGCC
CTGCCCCCCA TGGAGGGGGT CCAGACGGTT CCCGGCCTGG CGGAAAAGGT CACGGTACAG
CGCGACAACA TGGGCATTCC CATGATCGAC GCCGCCTCAC TGGAGGACCT GGTCTTTGCC
ATGGGGTATG TCAGCGCCTA CGACCGGTTT ACCCAGATGG AGGGCTTCCG GCTGGTGGGC
CAGGGCCGGC TCTCCGAGCT GATCGGCAAG GCCACCCTGG AAATGGACAT CTACCTGCGG
GCGTTGAACG TAAACCAGGT CGCCACAATC CTTTACGAAA GCGCGTCTCC TGAACTGCTT
CACATGCTTA AACGCTACAG TGAAGGCGTC AATGCCTACA TGGACCAGGC GCCCCGGCCC
ATGACCCTCA AGCTGGCCGG ATACACACCC GAGCCATGGA CCGCCCTGGA TTCCGTGCGT
GTGTTCGTGG TGCTCACCCT GGGCCTGGCC CAGAACCTTC ACGAAGAGAT CAACATGCTC
AACGTGGCCC GGAAGGTGGC TGTTGACGAC CTGGCGTGGC TTTTTCCCAT CTACCCCGAC
GAGCCCCTGC CCTTTGACGA GATCAAAAAG CTCCAGGGGC TGGACCTGAC GGCAGCGGCC
GGGGATATTC AGGCCCTCTG CGACACGGCC CGCTCCGTCA ACCAGGTGCT GGTGCCGGCT
GCCGCGGCCT CCAACAACTG GGCCGTGTCC GGGCGCCGCA CCCGGTCCGG CAAACCCATC
CTGGCCAACG ACACCCACCT CCCCCTGTGC ATGCCCTCCA TCTGGCACAT GATGCATCTC
AAGTGCCCGG GACTTGAAGG CGCCGGAGTT GCCCTGGCCG GGGTACCGGG CATCATCGCC
GGATACAACG GCCACATGGC CGTGGGCATG ACCATGGTGA TGGCCGACAA CCAGGACGTG
TTTTTAGAAA AGATCAAACG GGAGCCGGAC GGCCTCTATT ACCTTTACAA AGACCAGTGG
AAAAAGGCCG CGGCCCGGCA GGAGACCTTC CGGATCAAGG GCGAAAAGGA CACGGTCCGC
ACCATCTATG AAACCGCAAA CGGCGTGCTC ATGAATGACA TTCTCACCGT CTCGCCGCGC
CACGATCTGA TGCCCCAGCC TGTAAACAAT TCGCCCCTGG GCATCGCCGT AAAATGGGCC
GTTATGGAAC CGGACCAGTC AATGGAAACC TTTTTCAGCA TCATGCGATC CAAATCCGTG
GACGAGGTGC TGGCCCATAC CCGAAAAGGC CACTCCATTA TTCCGTTGAA CCTGGTGATG
GCCGATGAAA AAGACATTGC CTGGCAGGTC ACCGGCCGGT ATCCCCTGCG CAAAAAAGGC
CGGGGCCTTT GCCCCTCACC GGGGTGGACC GGTGAATACG GATGGGAGGG TTACCTGGAT
CCGGCCCTGC ACCCGTCAGT GAAAAACCCG GACACCGGTT ACGTGGGCAC GGCCAACCAC
CGCACCGTAC CCGCCGACTT TCCCCATGTA CTCTCCTCTT CCTGGTACTA TCCGGACCGG
GCCCAGCGCA TACAGCAAAT GATCGAGACA ACAGACATCT ATGACGCGGA CACGGCCAGA
GCCATGCAGC TGGATGACTA CTCAGTCTTT ACCGAGACCG TTAAATCCCT TCTGCTGGAC
CCGGCCATGG CAGAGCGCAT GACCGCCACA TGGCAGGCCG CCGGACAAAT TGAGGCCGGG
CAGAAGGCCC TGGACCTGCT TTCCGGCTTT GACGGCCGCA TGGCCGTGGA CTCACCGGGT
GCGGCCCTGT ACGGGGCCTT CCTGTTCTGC CTGGGAGAAA ACCTGTTTGC AGACGAGATG
GGCGGCACCG GCTCCCAGGC CTACCACTCC CTGCTGGAGA CCTTTCTGAT GGCCTATTCG
GCCCTGCACG ACCATCTCAC CGACCGGTGC GAAACAAGCC CCTTCTGGGA CGATATAACC
ACCCCGGAAA AAGAGCAGCG GCCGCAGATC CTGGCAGACA CCCTGGCCGA TGCCGTGGCC
CTGGTGGAAA AACGGTGCGG CAAAGACACG GCCAAATGGC AGTGGGGAAA GCTGCACACC
GCCACCTGGA AAACCGATGC CTCCCTGCTG GCCGACTACA TGGGCTTTTT CGACCGTACC
GGTATCAAGT TTCTCTCCGG CTATTTTGAC CGGGGGCCTT ATCCAGCGCC CGGGGACCAC
ACCACGCTGA ACGTGGCGGC CTACTACCCG GGGAAAAACT TTGACGTGTG GCTGATTCCG
GCAATGCGCG TCATCGCGGA TTTCGGCGGC GAGGAGCCGC TGACCGGCAT CAACAGCTCG
GGCCAGTCGG ACAACCCGGC CAGCCCCCAC TACGACGACG GCATCACCGC CTGGCGTGAG
GGTCGGTACA AGGAATTTCC CTTTGCAAAG GAGGGTGTGG ACGCGCTCTA CACAAACGTG
CTGACCCTGG AACCGGCGGC CAGATAA
 
Protein sequence
MKTGSLTRTC RICVPVMTAL LLCLATTGCA PLLNSVFDNA LPPMEGVQTV PGLAEKVTVQ 
RDNMGIPMID AASLEDLVFA MGYVSAYDRF TQMEGFRLVG QGRLSELIGK ATLEMDIYLR
ALNVNQVATI LYESASPELL HMLKRYSEGV NAYMDQAPRP MTLKLAGYTP EPWTALDSVR
VFVVLTLGLA QNLHEEINML NVARKVAVDD LAWLFPIYPD EPLPFDEIKK LQGLDLTAAA
GDIQALCDTA RSVNQVLVPA AAASNNWAVS GRRTRSGKPI LANDTHLPLC MPSIWHMMHL
KCPGLEGAGV ALAGVPGIIA GYNGHMAVGM TMVMADNQDV FLEKIKREPD GLYYLYKDQW
KKAAARQETF RIKGEKDTVR TIYETANGVL MNDILTVSPR HDLMPQPVNN SPLGIAVKWA
VMEPDQSMET FFSIMRSKSV DEVLAHTRKG HSIIPLNLVM ADEKDIAWQV TGRYPLRKKG
RGLCPSPGWT GEYGWEGYLD PALHPSVKNP DTGYVGTANH RTVPADFPHV LSSSWYYPDR
AQRIQQMIET TDIYDADTAR AMQLDDYSVF TETVKSLLLD PAMAERMTAT WQAAGQIEAG
QKALDLLSGF DGRMAVDSPG AALYGAFLFC LGENLFADEM GGTGSQAYHS LLETFLMAYS
ALHDHLTDRC ETSPFWDDIT TPEKEQRPQI LADTLADAVA LVEKRCGKDT AKWQWGKLHT
ATWKTDASLL ADYMGFFDRT GIKFLSGYFD RGPYPAPGDH TTLNVAAYYP GKNFDVWLIP
AMRVIADFGG EEPLTGINSS GQSDNPASPH YDDGITAWRE GRYKEFPFAK EGVDALYTNV
LTLEPAAR